Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 RPL7P37-201ENST00000425095 738 ntBASIC2.63□□□□□ -1.99
RAF1P04049 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.63□□□□□ -1.99
RAF1P04049 AL139132.1-201ENST00000431587 344 ntBASIC2.63□□□□□ -1.99
RAF1P04049 AC105272.1-201ENST00000438604 198 ntBASIC2.63□□□□□ -1.99
RAF1P04049 AL360271.2-201ENST00000447710 161 ntBASIC2.63□□□□□ -1.99
RAF1P04049 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.63□□□□□ -1.99
RAF1P04049 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.63□□□□□ -1.99
RAF1P04049 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.63□□□□□ -1.99
RAF1P04049 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.63□□□□□ -1.99
RAF1P04049 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.63□□□□□ -1.99
RAF1P04049 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.63□□□□□ -1.99
RAF1P04049 LRRC34P2-201ENST00000514850 553 ntBASIC2.63□□□□□ -1.99
RAF1P04049 RNU2-69P-201ENST00000516061 100 ntBASIC2.63□□□□□ -1.99
RAF1P04049 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.63□□□□□ -1.99
RAF1P04049 OR11H5P-201ENST00000554039 926 ntBASIC2.63□□□□□ -1.99
RAF1P04049 AC025281.1-201ENST00000567026 265 ntBASIC2.63□□□□□ -1.99
RAF1P04049 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.63□□□□□ -1.99
RAF1P04049 MIR1273C-201ENST00000578669 77 ntBASIC2.63□□□□□ -1.99
RAF1P04049 AC005730.3-201ENST00000583067 366 ntBASIC2.63□□□□□ -1.99
RAF1P04049 AC092807.2-201ENST00000609367 243 ntBASIC2.63□□□□□ -1.99
RAF1P04049 IGHVIII-44-202ENST00000636235 289 ntBASIC2.63□□□□□ -1.99
RAF1P04049 U6.99-201ENST00000637524 83 ntBASIC2.63□□□□□ -1.99
RAF1P04049 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
RAF1P04049 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RAF1P04049 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
RAF1P04049 Y_RNA.399-201ENST00000383955 105 ntBASIC2.62□□□□□ -1.99
RAF1P04049 RNU1-109P-201ENST00000383960 147 ntBASIC2.62□□□□□ -1.99
RAF1P04049 SNORA75B-201ENST00000384053 137 ntBASIC2.62□□□□□ -1.99
RAF1P04049 RNU4-26P-201ENST00000410270 107 ntBASIC2.62□□□□□ -1.99
RAF1P04049 RPL21P90-201ENST00000415692 466 ntBASIC2.62□□□□□ -1.99
RAF1P04049 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.62□□□□□ -1.99
RAF1P04049 HMGB1P9-201ENST00000429856 646 ntBASIC2.62□□□□□ -1.99
RAF1P04049 Z96811.1-201ENST00000445880 108 ntBASIC2.62□□□□□ -1.99
RAF1P04049 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.62□□□□□ -1.99
RAF1P04049 RNU6-1208P-201ENST00000459588 107 ntBASIC2.62□□□□□ -1.99
RAF1P04049 AC128713.1-201ENST00000471495 306 ntBASIC2.62□□□□□ -1.99
RAF1P04049 AP000852.1-201ENST00000472460 573 ntBASIC2.62□□□□□ -1.99
RAF1P04049 AC022493.1-201ENST00000492984 337 ntBASIC2.62□□□□□ -1.99
RAF1P04049 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.62□□□□□ -1.99
RAF1P04049 AC104136.1-201ENST00000512969 394 ntBASIC2.62□□□□□ -1.99
RAF1P04049 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.62□□□□□ -1.99
RAF1P04049 AC004486.1-201ENST00000546846 233 ntBASIC2.62□□□□□ -1.99
RAF1P04049 AL157871.3-201ENST00000557231 293 ntBASIC2.62□□□□□ -1.99
RAF1P04049 MTCO3P23-201ENST00000561363 289 ntBASIC2.62□□□□□ -1.99
RAF1P04049 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.62□□□□□ -1.99
RAF1P04049 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.62□□□□□ -1.99
RAF1P04049 AC073539.2-201ENST00000597113 165 ntBASIC2.62□□□□□ -1.99
RAF1P04049 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.62□□□□□ -1.99
RAF1P04049 AC090115.4-201ENST00000609970 188 ntBASIC2.62□□□□□ -1.99
RAF1P04049 AL136221.1-201ENST00000621449 509 ntBASIC2.62□□□□□ -1.99
RAF1P04049 AL359757.2-201ENST00000624309 274 ntBASIC2.62□□□□□ -1.99
RAF1P04049 AL008636.1-201ENST00000625038 1018 ntBASIC2.62□□□□□ -1.99
RAF1P04049 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.62□□□□□ -1.99
RAF1P04049 AC110491.1-201ENST00000562191 2010 ntBASIC2.62□□□□□ -1.99
RAF1P04049 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RAF1P04049 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RAF1P04049 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
RAF1P04049 AC073325.2-201ENST00000339545 159 ntBASIC2.61□□□□□ -1.99
RAF1P04049 RNU6-82P-201ENST00000363970 107 ntBASIC2.61□□□□□ -1.99
RAF1P04049 SNORD56.5-201ENST00000364281 72 ntBASIC2.61□□□□□ -1.99
RAF1P04049 U3.12-201ENST00000364498 214 ntBASIC2.61□□□□□ -1.99
RAF1P04049 RNU5E-4P-201ENST00000364931 120 ntBASIC2.61□□□□□ -1.99
RAF1P04049 Y_RNA.373-201ENST00000365600 103 ntBASIC2.61□□□□□ -1.99
RAF1P04049 RNU6-434P-201ENST00000384376 107 ntBASIC2.61□□□□□ -1.99
RAF1P04049 RNU6-45P-201ENST00000384471 107 ntBASIC2.61□□□□□ -1.99
RAF1P04049 RPS4XP7-201ENST00000406274 780 ntBASIC2.61□□□□□ -1.99
RAF1P04049 RNU6-1025P-201ENST00000410629 104 ntBASIC2.61□□□□□ -1.99
RAF1P04049 POLHP1-201ENST00000411806 470 ntBASIC2.61□□□□□ -1.99
RAF1P04049 BX682237.1-201ENST00000415016 335 ntBASIC2.61□□□□□ -1.99
RAF1P04049 ARL5AP1-201ENST00000418991 388 ntBASIC2.61□□□□□ -1.99
RAF1P04049 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.61□□□□□ -1.99
RAF1P04049 AL135938.1-201ENST00000443141 297 ntBASIC2.61□□□□□ -1.99
RAF1P04049 MTND5P20-201ENST00000448677 143 ntBASIC2.61□□□□□ -1.99
RAF1P04049 PMCHL2-203ENST00000457791 237 ntBASIC2.61□□□□□ -1.99
RAF1P04049 DYNLL1P5-201ENST00000467158 270 ntBASIC2.61□□□□□ -1.99
RAF1P04049 RN7SL297P-201ENST00000483161 293 ntBASIC2.61□□□□□ -1.99
RAF1P04049 AC083904.1-201ENST00000487828 231 ntBASIC2.61□□□□□ -1.99
RAF1P04049 Y_RNA.654-201ENST00000497848 106 ntBASIC2.61□□□□□ -1.99
RAF1P04049 HMGN1P12-201ENST00000499125 195 ntBASIC2.61□□□□□ -1.99
RAF1P04049 AC008628.2-201ENST00000502605 298 ntBASIC2.61□□□□□ -1.99
RAF1P04049 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.61□□□□□ -1.99
RAF1P04049 MRPS36P2-201ENST00000512569 299 ntBASIC2.61□□□□□ -1.99
RAF1P04049 RNU6-1314P-201ENST00000517139 104 ntBASIC2.61□□□□□ -1.99
RAF1P04049 AC009902.1-201ENST00000519351 183 ntBASIC2.61□□□□□ -1.99
RAF1P04049 RPL7P20-201ENST00000520308 745 ntBASIC2.61□□□□□ -1.99
RAF1P04049 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.61□□□□□ -1.99
RAF1P04049 AC107016.2-201ENST00000547968 190 ntBASIC2.61□□□□□ -1.99
RAF1P04049 NACAP3-201ENST00000552100 481 ntBASIC2.61□□□□□ -1.99
RAF1P04049 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.61□□□□□ -1.99
RAF1P04049 MIR4319-201ENST00000577285 85 ntBASIC2.61□□□□□ -1.99
RAF1P04049 MIR3670-2-201ENST00000582974 65 ntBASIC2.61□□□□□ -1.99
RAF1P04049 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.61□□□□□ -1.99
RAF1P04049 MIR3670-1-201ENST00000584160 65 ntBASIC2.61□□□□□ -1.99
RAF1P04049 MIR3670-3-201ENST00000584855 65 ntBASIC2.61□□□□□ -1.99
RAF1P04049 MIR548AC-201ENST00000585049 88 ntBASIC2.61□□□□□ -1.99
RAF1P04049 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.61□□□□□ -1.99
RAF1P04049 AC020895.1-201ENST00000595362 272 ntBASIC2.61□□□□□ -1.99
RAF1P04049 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.61□□□□□ -1.99
RAF1P04049 MIR3670-4-201ENST00000612260 65 ntBASIC2.61□□□□□ -1.99
RAF1P04049 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms