Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AC078899.2-201ENST00000595282 212 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AC025165.5-201ENST00000602802 578 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AL353778.1-201ENST00000603149 408 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AL096840.1-201ENST00000603287 93 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AL670379.10-201ENST00000604330 253 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AC112191.3-201ENST00000604371 277 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AL022161.1-201ENST00000604390 213 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AL138963.2-201ENST00000605137 226 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AL158032.1-201ENST00000605401 106 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AL670379.9-201ENST00000605428 253 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AC126118.1-201ENST00000607744 628 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AC131159.1-201ENST00000621854 213 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AC024940.5-201ENST00000622889 474 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AC099654.13-201ENST00000639774 207 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CPSF4O95639 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CPSF4O95639 SNORD3E-201ENST00000362899 217 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 RNA5SP190-201ENST00000365222 118 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 RNU1-148P-201ENST00000384472 162 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 SNORA67.6-201ENST00000391093 99 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 SNORA26.9-201ENST00000391322 122 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 MIR1289-2-201ENST00000408360 111 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.38□□□□□ -2.19
CPSF4O95639 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.38□□□□□ -2.19
CPSF4O95639 AL353621.1-201ENST00000418219 243 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 AC137499.1-201ENST00000427602 88 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.38□□□□□ -2.19
CPSF4O95639 AL353706.1-201ENST00000436728 494 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 UBE2D3P4-201ENST00000441973 436 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 SNRPGP13-201ENST00000442212 177 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 KATNBL1P6-201ENST00000453433 915 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.38□□□□□ -2.19
CPSF4O95639 PMCHL2-203ENST00000457791 237 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 RNU7-125P-201ENST00000458760 62 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 MTCO2P29-201ENST00000465212 189 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.38□□□□□ -2.19
CPSF4O95639 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.38□□□□□ -2.19
CPSF4O95639 RPL7P43-201ENST00000478876 753 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 AC140059.1-201ENST00000489238 361 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 AC018437.1-201ENST00000492214 406 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.38□□□□□ -2.19
CPSF4O95639 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.38□□□□□ -2.19
CPSF4O95639 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.38□□□□□ -2.19
CPSF4O95639 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.38□□□□□ -2.19
CPSF4O95639 RN7SKP287-201ENST00000516546 266 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 RNU5B-3P-201ENST00000516601 115 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.38□□□□□ -2.19
CPSF4O95639 AC092325.1-201ENST00000566449 554 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CPSF4O95639 WISP1-OT1-201ENST00000602893 642 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 AL022154.1-201ENST00000604698 785 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 AC093424.1-201ENST00000604999 338 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 AL359547.2-201ENST00000615810 418 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 SDR42E1P4-201ENST00000620894 481 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
CPSF4O95639 MTND5P10-201ENST00000603719 1809 ntBASIC1.38□□□□□ -2.19
CPSF4O95639 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CPSF4O95639 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.37□□□□□ -2.19
CPSF4O95639 Y_RNA.560-201ENST00000384689 102 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 MIR23A-201ENST00000385245 73 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 MIR1302-8-201ENST00000408342 128 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 RN7SKP158-201ENST00000410453 326 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 AC009518.2-201ENST00000418056 731 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 ELOCP4-201ENST00000420090 333 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.37□□□□□ -2.19
CPSF4O95639 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.37□□□□□ -2.19
CPSF4O95639 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.37□□□□□ -2.19
CPSF4O95639 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.37□□□□□ -2.19
CPSF4O95639 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.37□□□□□ -2.19
CPSF4O95639 TAF9P1-201ENST00000445421 515 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 AL513124.1-201ENST00000450410 614 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CPSF4O95639 TAF9P2-201ENST00000454958 515 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 SNORD13-201ENST00000459299 104 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 snoU109.2-201ENST00000459316 135 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.37□□□□□ -2.19
CPSF4O95639 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.37□□□□□ -2.19
CPSF4O95639 AC117522.2-201ENST00000510049 657 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 AC108078.2-201ENST00000510750 236 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 RNU6-123P-201ENST00000516163 102 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 RNA5SP61-201ENST00000516453 100 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.37□□□□□ -2.19
CPSF4O95639 AC022878.1-201ENST00000530684 149 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 AP000873.5-201ENST00000533906 236 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.37□□□□□ -2.19
CPSF4O95639 RPL21P5-201ENST00000554662 472 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 MIR3683-201ENST00000580847 82 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 MIR4760-201ENST00000585040 80 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 DEFB131E-202ENST00000602581 683 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 AC087045.1-201ENST00000605856 382 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 AL451064.1-201ENST00000607718 471 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.37□□□□□ -2.19
CPSF4O95639 AC012409.4-201ENST00000612923 249 ntBASIC1.37□□□□□ -2.19
CPSF4O95639 AC002543.1-201ENST00000299783 1954 ntBASIC1.36□□□□□ -2.19
CPSF4O95639 AC138393.1-203ENST00000327086 343 ntBASIC1.36□□□□□ -2.19
CPSF4O95639 RNU6-858P-201ENST00000362436 107 ntBASIC1.36□□□□□ -2.19
CPSF4O95639 RNU1-62P-201ENST00000362599 164 ntBASIC1.36□□□□□ -2.19
CPSF4O95639 MIR558-201ENST00000384920 94 ntBASIC1.36□□□□□ -2.19
CPSF4O95639 CISD1P1-201ENST00000393907 327 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms