Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 RNU6-1103P-201ENST00000384150 107 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 RNU6-1179P-201ENST00000384667 107 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 GSTA9P-201ENST00000406231 611 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 Y_RNA.623-201ENST00000411128 95 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 RNU6-387P-201ENST00000411331 105 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 RPL21P90-201ENST00000415692 466 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 MTATP6P18-201ENST00000417994 673 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.21□□□□□ -2.06
LCMT2O60294 AL353193.1-201ENST00000421444 268 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 EIF4EP4-201ENST00000424916 578 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 MTCO2P19-201ENST00000427513 598 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.21□□□□□ -2.06
LCMT2O60294 AC004383.1-201ENST00000438135 289 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 AC003071.1-201ENST00000451219 789 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 AL441985.1-201ENST00000457727 251 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 RNU7-182P-201ENST00000459009 62 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 MRPL42P6-201ENST00000486397 371 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 MTND2P33-201ENST00000506452 1031 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 MTCO3P9-201ENST00000506989 781 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 AC108078.1-201ENST00000508073 725 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 AC116655.1-201ENST00000508324 901 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.21□□□□□ -2.06
LCMT2O60294 RNA5SP281-201ENST00000516504 135 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 IGLV3-17-201ENST00000519099 244 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.21□□□□□ -2.06
LCMT2O60294 AP003392.2-201ENST00000527269 208 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LCMT2O60294 AC135279.1-201ENST00000543493 504 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 AC024909.2-201ENST00000553035 286 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 AC121758.2-201ENST00000553271 193 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 AC103987.3-201ENST00000582071 292 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 MIR5007-201ENST00000583098 95 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 AC008752.3-201ENST00000588113 712 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 AC073539.2-201ENST00000597113 165 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 AC091805.2-201ENST00000603848 235 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 MIR6895-201ENST00000613497 78 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.21□□□□□ -2.06
LCMT2O60294 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LCMT2O60294 SEPT14P19-203ENST00000633205 211 ntBASIC2.21□□□□□ -2.06
LCMT2O60294 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.21□□□□□ -2.06
LCMT2O60294 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.2□□□□□ -2.06
LCMT2O60294 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCMT2O60294 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.2□□□□□ -2.06
LCMT2O60294 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCMT2O60294 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCMT2O60294 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCMT2O60294 AL139276.1-201ENST00000311910 1001 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCMT2O60294 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCMT2O60294 RNU6-1287P-201ENST00000362914 107 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 RNU6-384P-201ENST00000364900 104 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.2□□□□□ -2.06
LCMT2O60294 Y_RNA.436-201ENST00000384097 102 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 RNU6-1060P-201ENST00000384664 107 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 Y_RNA.559-201ENST00000384686 107 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 AL591416.1-201ENST00000404015 867 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.2□□□□□ -2.06
LCMT2O60294 AL139413.1-201ENST00000421309 217 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 AC003685.2-201ENST00000422795 395 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 RPS3AP44-201ENST00000425466 790 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.2□□□□□ -2.06
LCMT2O60294 AC010975.2-201ENST00000427781 588 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.2□□□□□ -2.06
LCMT2O60294 VN1R108P-201ENST00000431580 830 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.2□□□□□ -2.06
LCMT2O60294 AC011753.1-201ENST00000451001 220 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 snoU109.2-201ENST00000459316 135 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.2□□□□□ -2.06
LCMT2O60294 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 MTND3P5-201ENST00000512798 333 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 SNORA25.11-201ENST00000515935 105 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 RNU1-86P-201ENST00000516108 154 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 RNA5SP24-201ENST00000516478 95 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 RNU1-107P-201ENST00000516617 154 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCMT2O60294 AL512310.1-201ENST00000548639 172 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 AC092325.1-201ENST00000566449 554 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 AC007684.1-201ENST00000609671 477 ntBASIC2.2□□□□□ -2.06
LCMT2O60294 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.2□□□□□ -2.06
LCMT2O60294 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCMT2O60294 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCMT2O60294 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCMT2O60294 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCMT2O60294 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.19□□□□□ -2.06
LCMT2O60294 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCMT2O60294 MTND5P26-201ENST00000426018 1752 ntBASIC2.19□□□□□ -2.06
LCMT2O60294 MIR412-201ENST00000362142 91 ntBASIC2.19□□□□□ -2.06
LCMT2O60294 RNU6-1120P-201ENST00000362988 108 ntBASIC2.19□□□□□ -2.06
LCMT2O60294 SNORD14B-201ENST00000364533 90 ntBASIC2.19□□□□□ -2.06
LCMT2O60294 Y_RNA.296-201ENST00000364930 108 ntBASIC2.19□□□□□ -2.06
LCMT2O60294 Y_RNA.318-201ENST00000365131 97 ntBASIC2.19□□□□□ -2.06
LCMT2O60294 RNU6-1280P-201ENST00000365211 107 ntBASIC2.19□□□□□ -2.06
LCMT2O60294 RNU5A-6P-201ENST00000384136 116 ntBASIC2.19□□□□□ -2.06
LCMT2O60294 AF274854.1-201ENST00000413236 615 ntBASIC2.19□□□□□ -2.06
LCMT2O60294 AC073464.1-201ENST00000429823 534 ntBASIC2.19□□□□□ -2.06
LCMT2O60294 AL596276.1-201ENST00000434465 418 ntBASIC2.19□□□□□ -2.06
LCMT2O60294 HIGD1AP2-201ENST00000446367 280 ntBASIC2.19□□□□□ -2.06
LCMT2O60294 BTF3P15-201ENST00000455606 336 ntBASIC2.19□□□□□ -2.06
LCMT2O60294 AC022364.2-201ENST00000457963 554 ntBASIC2.19□□□□□ -2.06
LCMT2O60294 RPL22P13-201ENST00000493291 347 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms