Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.8□□□□□ -2.12
CDC7O00311 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.8□□□□□ -2.12
CDC7O00311 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.8□□□□□ -2.12
CDC7O00311 snoU109.2-201ENST00000459316 135 ntBASIC1.8□□□□□ -2.12
CDC7O00311 MTCO2P29-201ENST00000465212 189 ntBASIC1.8□□□□□ -2.12
CDC7O00311 AC108078.2-201ENST00000510750 236 ntBASIC1.8□□□□□ -2.12
CDC7O00311 RNU6-123P-201ENST00000516163 102 ntBASIC1.8□□□□□ -2.12
CDC7O00311 RNU2-19P-201ENST00000517288 84 ntBASIC1.8□□□□□ -2.12
CDC7O00311 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.8□□□□□ -2.12
CDC7O00311 AC233702.2-202ENST00000562547 291 ntBASIC1.8□□□□□ -2.12
CDC7O00311 HMGN1P30-201ENST00000589286 268 ntBASIC1.8□□□□□ -2.12
CDC7O00311 AC234772.3-201ENST00000602277 528 ntBASIC1.8□□□□□ -2.12
CDC7O00311 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.8□□□□□ -2.12
CDC7O00311 AL096840.1-201ENST00000603287 93 ntBASIC1.8□□□□□ -2.12
CDC7O00311 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.8□□□□□ -2.12
CDC7O00311 MIR7844-201ENST00000616161 122 ntBASIC1.8□□□□□ -2.12
CDC7O00311 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDC7O00311 AL356292.1-201ENST00000283110 373 ntBASIC1.79□□□□□ -2.12
CDC7O00311 RNU6-1159P-201ENST00000362933 107 ntBASIC1.79□□□□□ -2.12
CDC7O00311 RNU6-942P-201ENST00000363002 107 ntBASIC1.79□□□□□ -2.12
CDC7O00311 SNORD114-19-201ENST00000363072 75 ntBASIC1.79□□□□□ -2.12
CDC7O00311 RNU5F-7P-201ENST00000363696 115 ntBASIC1.79□□□□□ -2.12
CDC7O00311 SNORD14B-201ENST00000364533 90 ntBASIC1.79□□□□□ -2.12
CDC7O00311 RNU6-72P-201ENST00000384285 79 ntBASIC1.79□□□□□ -2.12
CDC7O00311 RNU1-57P-201ENST00000384491 166 ntBASIC1.79□□□□□ -2.12
CDC7O00311 AC138623.1-201ENST00000418060 216 ntBASIC1.79□□□□□ -2.12
CDC7O00311 ELOCP4-201ENST00000420090 333 ntBASIC1.79□□□□□ -2.12
CDC7O00311 AL445685.2-201ENST00000422551 342 ntBASIC1.79□□□□□ -2.12
CDC7O00311 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.79□□□□□ -2.12
CDC7O00311 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.79□□□□□ -2.12
CDC7O00311 AC137499.1-201ENST00000427602 88 ntBASIC1.79□□□□□ -2.12
CDC7O00311 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.79□□□□□ -2.12
CDC7O00311 AL627311.1-201ENST00000431514 115 ntBASIC1.79□□□□□ -2.12
CDC7O00311 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.79□□□□□ -2.12
CDC7O00311 MTND5P2-201ENST00000442927 1142 ntBASIC1.79□□□□□ -2.12
CDC7O00311 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.79□□□□□ -2.12
CDC7O00311 AC107032.1-201ENST00000485945 480 ntBASIC1.79□□□□□ -2.12
CDC7O00311 AC018868.1-201ENST00000491307 315 ntBASIC1.79□□□□□ -2.12
CDC7O00311 RPS29P11-201ENST00000496507 171 ntBASIC1.79□□□□□ -2.12
CDC7O00311 HMGB3P17-201ENST00000504195 649 ntBASIC1.79□□□□□ -2.12
CDC7O00311 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.79□□□□□ -2.12
CDC7O00311 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.79□□□□□ -2.12
CDC7O00311 AC110588.1-201ENST00000559699 137 ntBASIC1.79□□□□□ -2.12
CDC7O00311 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
CDC7O00311 AC007229.1-201ENST00000590455 412 ntBASIC1.79□□□□□ -2.12
CDC7O00311 RPL30P11-203ENST00000598995 310 ntBASIC1.79□□□□□ -2.12
CDC7O00311 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.79□□□□□ -2.12
CDC7O00311 AC096772.1-201ENST00000609146 564 ntBASIC1.79□□□□□ -2.12
CDC7O00311 AP001486.3-201ENST00000615334 372 ntBASIC1.79□□□□□ -2.12
CDC7O00311 AC099654.13-201ENST00000639774 207 ntBASIC1.79□□□□□ -2.12
CDC7O00311 SNORA72.3-201ENST00000365074 132 ntBASIC1.78□□□□□ -2.12
CDC7O00311 SNORA25B-201ENST00000365507 128 ntBASIC1.78□□□□□ -2.12
CDC7O00311 MIR10A-201ENST00000385043 110 ntBASIC1.78□□□□□ -2.12
CDC7O00311 MIR676-201ENST00000390702 67 ntBASIC1.78□□□□□ -2.12
CDC7O00311 MRPL42P2-201ENST00000403169 426 ntBASIC1.78□□□□□ -2.12
CDC7O00311 AL031779.1-201ENST00000415663 330 ntBASIC1.78□□□□□ -2.12
CDC7O00311 AL356583.2-201ENST00000426536 280 ntBASIC1.78□□□□□ -2.12
CDC7O00311 RPS24P1-201ENST00000438550 371 ntBASIC1.78□□□□□ -2.12
CDC7O00311 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.78□□□□□ -2.12
CDC7O00311 HMGN2P23-201ENST00000456759 269 ntBASIC1.78□□□□□ -2.12
CDC7O00311 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.78□□□□□ -2.12
CDC7O00311 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.78□□□□□ -2.12
CDC7O00311 SNORA3.4-201ENST00000515969 96 ntBASIC1.78□□□□□ -2.12
CDC7O00311 RN7SKP265-201ENST00000516448 223 ntBASIC1.78□□□□□ -2.12
CDC7O00311 RN7SKP219-201ENST00000516825 296 ntBASIC1.78□□□□□ -2.12
CDC7O00311 AP004607.1-201ENST00000524456 203 ntBASIC1.78□□□□□ -2.12
CDC7O00311 ADI1P3-201ENST00000549509 470 ntBASIC1.78□□□□□ -2.12
CDC7O00311 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.78□□□□□ -2.12
CDC7O00311 AC093249.1-201ENST00000567049 203 ntBASIC1.78□□□□□ -2.12
CDC7O00311 MIR3122-201ENST00000577243 73 ntBASIC1.78□□□□□ -2.12
CDC7O00311 MIR4419B-201ENST00000577260 68 ntBASIC1.78□□□□□ -2.12
CDC7O00311 MIR548AC-201ENST00000585049 88 ntBASIC1.78□□□□□ -2.12
CDC7O00311 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CDC7O00311 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.78□□□□□ -2.12
CDC7O00311 AL031274.2-201ENST00000599419 203 ntBASIC1.78□□□□□ -2.12
CDC7O00311 AC073410.2-201ENST00000603240 332 ntBASIC1.78□□□□□ -2.12
CDC7O00311 AC021646.1-201ENST00000605469 484 ntBASIC1.78□□□□□ -2.12
CDC7O00311 AC004223.4-201ENST00000612426 332 ntBASIC1.78□□□□□ -2.12
CDC7O00311 AC009878.1-201ENST00000621819 340 ntBASIC1.78□□□□□ -2.12
CDC7O00311 MIR3529-201ENST00000637713 78 ntBASIC1.78□□□□□ -2.12
CDC7O00311 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
CDC7O00311 AC131280.1-202ENST00000624067 4211 ntBASIC1.77□□□□□ -2.13
CDC7O00311 RNU5E-5P-201ENST00000365379 116 ntBASIC1.77□□□□□ -2.13
CDC7O00311 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.77□□□□□ -2.13
CDC7O00311 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CDC7O00311 SNORA24.1-201ENST00000384401 135 ntBASIC1.77□□□□□ -2.13
CDC7O00311 RNU6-843P-201ENST00000384454 104 ntBASIC1.77□□□□□ -2.13
CDC7O00311 MIR578-201ENST00000384828 96 ntBASIC1.77□□□□□ -2.13
CDC7O00311 MIR9-3-201ENST00000385084 90 ntBASIC1.77□□□□□ -2.13
CDC7O00311 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CDC7O00311 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CDC7O00311 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.77□□□□□ -2.13
CDC7O00311 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.77□□□□□ -2.13
CDC7O00311 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.77□□□□□ -2.13
CDC7O00311 CALM1P1-201ENST00000442082 433 ntBASIC1.77□□□□□ -2.13
CDC7O00311 USP9YP15-201ENST00000442391 422 ntBASIC1.77□□□□□ -2.13
CDC7O00311 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.77□□□□□ -2.13
CDC7O00311 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.77□□□□□ -2.13
CDC7O00311 HMGB1P30-201ENST00000492455 606 ntBASIC1.77□□□□□ -2.13
CDC7O00311 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms