Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL162395.1-201ENST00000457882 422 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.22□□□□□ -2.05
PDLIM1O00151 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.22□□□□□ -2.05
PDLIM1O00151 AC117522.2-201ENST00000510049 657 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 AC079140.3-201ENST00000511111 550 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.22□□□□□ -2.05
PDLIM1O00151 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.22□□□□□ -2.05
PDLIM1O00151 RN7SKP24-201ENST00000515888 284 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.22□□□□□ -2.05
PDLIM1O00151 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.22□□□□□ -2.05
PDLIM1O00151 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.22□□□□□ -2.05
PDLIM1O00151 MIR3611-201ENST00000584484 83 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 NBR2-204ENST00000587322 63 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 AC008121.1-201ENST00000603244 268 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 AC008536.2-201ENST00000607284 349 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 AC067747.1-201ENST00000608026 250 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 AC092656.1-203ENST00000624134 423 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.22□□□□□ -2.05
PDLIM1O00151 HSPA8P4-201ENST00000511877 1920 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 AL359854.1-201ENST00000614203 1594 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.22□□□□□ -2.05
PDLIM1O00151 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.22□□□□□ -2.05
PDLIM1O00151 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PDLIM1O00151 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PDLIM1O00151 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.21□□□□□ -2.06
PDLIM1O00151 Y_RNA.500-201ENST00000384466 111 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 RNU6-220P-201ENST00000390919 107 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PDLIM1O00151 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PDLIM1O00151 AL445529.1-201ENST00000398713 389 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 AL133475.1-201ENST00000404414 305 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.21□□□□□ -2.06
PDLIM1O00151 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.21□□□□□ -2.06
PDLIM1O00151 PGBD4P6-201ENST00000421501 610 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 TOMM20P4-201ENST00000427861 435 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 MTCO2P11-201ENST00000431069 680 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.21□□□□□ -2.06
PDLIM1O00151 Z83846.1-201ENST00000446798 265 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 MTND1P18-201ENST00000448191 573 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 RPS3AP17-201ENST00000472594 777 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 RPL36AP48-201ENST00000485521 314 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 AC011005.2-201ENST00000487324 359 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 RPL22P13-201ENST00000493291 347 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 AC093534.1-201ENST00000504977 132 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.21□□□□□ -2.06
PDLIM1O00151 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.21□□□□□ -2.06
PDLIM1O00151 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.21□□□□□ -2.06
PDLIM1O00151 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.21□□□□□ -2.06
PDLIM1O00151 SNORD27.1-201ENST00000516319 72 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 SCARNA3-201ENST00000517097 143 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.21□□□□□ -2.06
PDLIM1O00151 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.21□□□□□ -2.06
PDLIM1O00151 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.21□□□□□ -2.06
PDLIM1O00151 AP005136.1-201ENST00000579765 429 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 AL670379.10-201ENST00000604330 253 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 AC012493.3-201ENST00000604494 112 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 AL670379.9-201ENST00000605428 253 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 AL021997.1-201ENST00000605757 193 ntBASIC2.21□□□□□ -2.06
PDLIM1O00151 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.21□□□□□ -2.06
PDLIM1O00151 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PDLIM1O00151 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PDLIM1O00151 Y_RNA.296-201ENST00000364930 108 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 RNU6-1029P-201ENST00000384109 107 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 RNU6-550P-201ENST00000391057 101 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 DEFB108C-201ENST00000400154 252 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 FTH1P15-201ENST00000406984 280 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 EEF1A1P40-201ENST00000412883 573 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 AC009963.1-201ENST00000417265 157 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 BX276092.3-201ENST00000424182 230 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PDLIM1O00151 AC000111.3-201ENST00000433478 193 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.2□□□□□ -2.06
PDLIM1O00151 NDUFB1P2-201ENST00000449477 176 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.2□□□□□ -2.06
PDLIM1O00151 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PDLIM1O00151 HMGB1P30-201ENST00000492455 606 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 AC079382.1-201ENST00000493346 557 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 SNORA25.11-201ENST00000515935 105 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 AP000889.1-201ENST00000530968 660 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 AC010186.2-204ENST00000537668 439 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 MIR5571-201ENST00000577998 113 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PDLIM1O00151 AC025449.1-201ENST00000603896 529 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 AC008945.2-201ENST00000606056 604 ntBASIC2.2□□□□□ -2.06
PDLIM1O00151 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.2□□□□□ -2.06
PDLIM1O00151 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.2□□□□□ -2.06
PDLIM1O00151 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.19□□□□□ -2.06
PDLIM1O00151 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PDLIM1O00151 AC138393.1-203ENST00000327086 343 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 Y_RNA.51-201ENST00000362725 102 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 SNORD114-30-201ENST00000364448 72 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 SNORD14B-201ENST00000364533 90 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 RNU6-1042P-201ENST00000384204 107 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 SNORA46.1-201ENST00000391069 153 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 EIF4EP4-201ENST00000424916 578 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 AL596276.1-201ENST00000434465 418 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.19□□□□□ -2.06
PDLIM1O00151 HIGD1AP2-201ENST00000446367 280 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 AL360271.2-201ENST00000447710 161 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 MTAPP1-201ENST00000489154 819 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms