Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3□□□□□ -1.93
SNX9Q9Y5X1 AC007547.1-201ENST00000462177 490 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 KC877373.1-201ENST00000479066 408 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 Y_RNA.654-201ENST00000497848 106 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 RAC1P5-201ENST00000512182 576 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 AC104136.1-201ENST00000512969 394 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 RNU6-56P-201ENST00000516986 93 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 SNORA31.21-201ENST00000517180 77 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3□□□□□ -1.93
SNX9Q9Y5X1 BTF3P12-201ENST00000519620 469 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3□□□□□ -1.93
SNX9Q9Y5X1 AC079600.2-201ENST00000550076 130 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3□□□□□ -1.93
SNX9Q9Y5X1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3□□□□□ -1.93
SNX9Q9Y5X1 ELOCP29-201ENST00000588193 334 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 AC073539.2-201ENST00000597113 165 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 Z82243.1-201ENST00000609432 473 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 AC090115.4-201ENST00000609970 188 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 AC107871.2-201ENST00000612894 502 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 AL161629.2-201ENST00000615347 275 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3□□□□□ -1.93
SNX9Q9Y5X1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 SNORA5B-201ENST00000363786 132 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 RNU6-741P-201ENST00000383889 107 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 SNORA75B-201ENST00000384053 137 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 RNU6-198P-201ENST00000384258 104 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 MIR181A2-201ENST00000384863 110 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 MIR634-201ENST00000385208 97 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 RNU6-1009P-201ENST00000390996 107 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 ARL5AP1-201ENST00000418991 388 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 ZNF863P-201ENST00000426746 417 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 IFNA20P-201ENST00000436840 528 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 PIGFP3-201ENST00000441918 722 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 MTND1P11-201ENST00000456661 876 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 RNU6-329P-201ENST00000459618 107 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 DYNLL1P5-201ENST00000467158 270 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AC022493.1-201ENST00000492984 337 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 RNU4-49P-201ENST00000516080 140 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AC090136.1-201ENST00000520009 240 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AP003122.3-201ENST00000526316 255 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 ATP5F1P5-201ENST00000526403 760 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AC084851.1-201ENST00000529105 249 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AMZ2P1-203ENST00000565833 850 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 MIR1273C-201ENST00000578669 77 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AC138761.3-201ENST00000579993 334 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AC107294.1-201ENST00000609524 467 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 AL359198.2-201ENST00000611836 194 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 Y_RNA.804-201ENST00000615262 101 ntBASIC2.99□□□□□ -1.93
SNX9Q9Y5X1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 ZNF519P1-201ENST00000449011 1626 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 RPL9P7-201ENST00000330965 580 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 Y_RNA.100-201ENST00000363141 102 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 Y_RNA.263-201ENST00000364659 114 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 MIR325-201ENST00000385260 98 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 RNU6-510P-201ENST00000391239 108 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 RPL21P75-201ENST00000396599 483 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 RPL21P28-201ENST00000401418 483 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 AL451074.5-201ENST00000415894 435 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 AC007919.1-201ENST00000429380 217 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 MYL8P-204ENST00000431574 518 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 Z96811.1-201ENST00000445880 108 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 AC092001.1-201ENST00000453012 261 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 CECR9-201ENST00000453421 199 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 RPL21P39-201ENST00000463605 483 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 AC087190.1-201ENST00000484462 480 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 AC093591.1-201ENST00000491435 481 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 RPL21P16-201ENST00000495531 483 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 AC008549.1-201ENST00000512900 643 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 SCOCP1-201ENST00000554676 349 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 ZNF861P-201ENST00000588126 639 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 AC002064.3-201ENST00000623448 346 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 AC110079.1-202ENST00000635213 138 ntBASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SNX9Q9Y5X1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 Y_RNA.142-201ENST00000363491 102 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 RNU1-112P-201ENST00000364401 164 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 Y_RNA.245-201ENST00000364493 95 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 Y_RNA.301-201ENST00000364990 103 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 SNORA32.2-201ENST00000384049 122 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 RNU6-434P-201ENST00000384376 107 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms