Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 KC877982.1-201ENST00000602313 470 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 AC016252.1-201ENST00000609721 474 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 AC117490.2-201ENST00000610042 594 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 7SK.8-201ENST00000612110 250 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 7SK.11-201ENST00000615477 250 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 7SK.13-201ENST00000622040 250 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 AC100821.1-201ENST00000523153 2479 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 AL589743.1-201ENST00000551932 2712 ntBASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 MIR193B-201ENST00000384907 83 ntBASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 AL161935.2-201ENST00000414627 60 ntBASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 AL353621.1-201ENST00000418219 243 ntBASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 AC010099.3-201ENST00000423896 409 ntBASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 SKA2P1-201ENST00000425592 390 ntBASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 AL358794.1-201ENST00000445689 381 ntBASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 SNORD124-201ENST00000459577 104 ntBASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 RNA5SP436-201ENST00000516020 115 ntBASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 RNA5SP134-201ENST00000516492 96 ntBASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 SNORA62.5-201ENST00000516634 120 ntBASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 SUMO2P14-201ENST00000604488 293 ntBASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 AC024257.5-201ENST00000612739 531 ntBASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 Z69720.2-201ENST00000624755 279 ntBASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 MIR6516-201ENST00000630554 81 ntBASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 AC010487.4-201ENST00000637027 61 ntBASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.18□□□□□ -2.38
UBE2D4Q9Y2X8 Y_RNA.393-201ENST00000383936 102 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 RNU6-152P-201ENST00000384037 107 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 MIR489-201ENST00000384923 84 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 Z86062.1-201ENST00000406773 777 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 RPS3AP1-201ENST00000413190 320 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 AC073614.1-201ENST00000438690 650 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 PTGES3P1-201ENST00000439531 483 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 MTND1P33-201ENST00000446251 917 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 AC092685.1-201ENST00000447960 1243 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 AC109329.1-201ENST00000518744 317 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 AC018659.1-201ENST00000551083 169 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 MIR5093-201ENST00000583199 100 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 HMGN1P30-201ENST00000589286 268 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 AL583856.2-201ENST00000606298 543 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 AC096772.1-201ENST00000609146 564 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 AC011939.3-201ENST00000613686 466 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 AC092608.3-201ENST00000625017 386 ntBASIC0.17□□□□□ -2.38
UBE2D4Q9Y2X8 RNU6-778P-201ENST00000363269 103 ntBASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 RNU6-233P-201ENST00000410845 141 ntBASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 UBE2V1P8-201ENST00000437166 265 ntBASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 AC112771.1-201ENST00000463581 102 ntBASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 SNORA70.22-201ENST00000517160 124 ntBASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 AP001893.2-201ENST00000526949 202 ntBASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 AP000763.2-201ENST00000540641 163 ntBASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 AC004217.3-201ENST00000551552 878 ntBASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 AC104229.1-201ENST00000561364 255 ntBASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 AC022432.1-201ENST00000595739 310 ntBASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 AC004067.1-201ENST00000608733 700 ntBASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 AL138726.1-201ENST00000614873 333 ntBASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 AC008993.2-201ENST00000631744 806 ntBASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 FARSBP1-201ENST00000435808 1778 ntBASIC0.16□□□□□ -2.38
UBE2D4Q9Y2X8 RNU6-348P-201ENST00000384386 107 ntBASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 SNX2P2-201ENST00000424553 323 ntBASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 FTH1P12-201ENST00000432137 551 ntBASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 AC091489.2-201ENST00000566263 604 ntBASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 AP003465.2-201ENST00000602571 373 ntBASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 AC105129.3-201ENST00000605455 485 ntBASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 MIR98-201ENST00000606724 119 ntBASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 AC011374.2-201ENST00000607135 526 ntBASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 PVT1_3.1-201ENST00000620853 95 ntBASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 U2.21-201ENST00000637295 81 ntBASIC0.15□□□□□ -2.39
UBE2D4Q9Y2X8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 RNU6-386P-201ENST00000362650 107 ntBASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 Y_RNA.112-201ENST00000363250 102 ntBASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 RNU6-112P-201ENST00000363599 104 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms