Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 snoU13.14-201ENST00000459372 104 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AC234781.5-201ENST00000508429 271 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AC119751.5-201ENST00000514077 770 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 SNORA4.4-201ENST00000515921 135 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 Y_RNA.717-201ENST00000517106 92 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AC034114.1-201ENST00000520293 285 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 OR11H5P-201ENST00000554039 926 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AC109446.2-201ENST00000567872 497 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 MIR5195-201ENST00000583555 115 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AL670379.4-201ENST00000605279 254 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 FARSBP1-201ENST00000435808 1778 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 RNA5SP68-201ENST00000363885 119 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 MT-TH-201ENST00000387441 69 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 SNORA40.3-201ENST00000390964 122 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 AL356967.1-201ENST00000406305 431 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 RAP1BP3-201ENST00000407180 549 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 AC074117.2-201ENST00000417130 397 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 PGBD4P6-201ENST00000421501 610 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 AC000111.3-201ENST00000433478 193 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 GPR143P-201ENST00000434155 205 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 AL022238.1-201ENST00000442557 355 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 AC079781.2-201ENST00000446424 169 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 AL021397.1-201ENST00000451806 248 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 SNORD42A-201ENST00000459584 64 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 AL121594.1-201ENST00000475906 575 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 RNA5SP200-201ENST00000516360 103 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 RNU6-586P-201ENST00000517265 104 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 NDUFA5P6-201ENST00000542110 379 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 BNIP3P6-201ENST00000549284 499 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 MIR4529-201ENST00000578110 78 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 MIR3935-201ENST00000583472 104 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 AC073539.2-201ENST00000597113 165 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 AC046143.2-201ENST00000609789 160 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 AC022202.1-201ENST00000613515 211 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 SDR42E1P4-201ENST00000620894 481 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 RMST_7.1-201ENST00000621935 268 ntBASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.81□□□□□ -2.12
KCNIP3Q9Y2W7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 FGF7P2-201ENST00000332473 296 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 Y_RNA.40-201ENST00000362645 93 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 RNU6-655P-201ENST00000362858 107 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 HMGN2P39-201ENST00000398005 273 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 RNU2-3P-201ENST00000410144 191 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 RNU6-195P-201ENST00000411352 109 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 OR6C66P-201ENST00000414917 930 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AL139413.1-201ENST00000421309 217 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 ISCA1P6-201ENST00000427740 390 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AL451074.3-201ENST00000437709 472 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AC107032.1-201ENST00000485945 480 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 RN7SL274P-201ENST00000492268 272 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 MTCO3P9-201ENST00000506989 781 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AC104806.1-201ENST00000508720 308 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 RN7SKP132-201ENST00000516001 208 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AC107953.1-201ENST00000522216 297 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AC098848.2-201ENST00000588023 330 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AC007229.1-201ENST00000590455 412 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AC078899.2-201ENST00000595282 212 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AL031274.2-201ENST00000599419 203 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AL096840.1-201ENST00000603287 93 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AC009314.1-201ENST00000603871 304 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AC026585.1-201ENST00000619582 524 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 AC091304.6-201ENST00000619761 202 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 DUXAP9-208ENST00000622815 614 ntBASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.8□□□□□ -2.12
KCNIP3Q9Y2W7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 RNU6-1210P-201ENST00000363775 107 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 RNU4-91P-201ENST00000364778 135 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 RNU6-108P-201ENST00000365558 107 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 RNU6-74P-201ENST00000384235 107 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 RNU6-297P-201ENST00000384636 107 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms