Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC110768.1-201ENST00000509222 400 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 RN7SKP21-201ENST00000516503 220 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 SNORA31.18-201ENST00000517043 134 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.32□□□□□ -1.88
RLIMQ9NVW2 TGIF1P1-201ENST00000558095 802 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 AC024153.1-201ENST00000603103 365 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 AC005046.1-201ENST00000608515 625 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 AC012531.5-201ENST00000611375 151 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 AC119674.1-207ENST00000641355 633 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RLIMQ9NVW2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.32□□□□□ -1.88
RLIMQ9NVW2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RLIMQ9NVW2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RLIMQ9NVW2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RLIMQ9NVW2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RLIMQ9NVW2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.31□□□□□ -1.88
RLIMQ9NVW2 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 Y_RNA.28-201ENST00000362554 111 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 SNORD56.1-201ENST00000362913 68 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 RNU6-490P-201ENST00000362985 107 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 RNU6-942P-201ENST00000363002 107 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 Y_RNA.533-201ENST00000384596 114 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RLIMQ9NVW2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RLIMQ9NVW2 RNU6-1245P-201ENST00000411130 106 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.31□□□□□ -1.88
RLIMQ9NVW2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.31□□□□□ -1.88
RLIMQ9NVW2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RLIMQ9NVW2 HMGN2P10-201ENST00000448085 265 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 AL031183.1-201ENST00000457667 207 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 SNRPGP7-201ENST00000469016 106 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 HMGN1P10-201ENST00000474557 553 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 AC116655.1-201ENST00000508324 901 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.31□□□□□ -1.88
RLIMQ9NVW2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.31□□□□□ -1.88
RLIMQ9NVW2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.31□□□□□ -1.88
RLIMQ9NVW2 AC021739.1-201ENST00000559631 174 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 MIR3160-1-201ENST00000577972 85 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.31□□□□□ -1.88
RLIMQ9NVW2 MIR8076-201ENST00000611401 83 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 AC083806.3-201ENST00000614016 455 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 AC007485.1-201ENST00000616755 206 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 AC022149.2-201ENST00000621061 203 ntBASIC3.31□□□□□ -1.88
RLIMQ9NVW2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RLIMQ9NVW2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RLIMQ9NVW2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.3□□□□□ -1.88
RLIMQ9NVW2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RLIMQ9NVW2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RLIMQ9NVW2 RNA5SP295-201ENST00000362655 121 ntBASIC3.3□□□□□ -1.88
RLIMQ9NVW2 Y_RNA.123-201ENST00000363338 102 ntBASIC3.3□□□□□ -1.88
RLIMQ9NVW2 Y_RNA.148-201ENST00000363557 117 ntBASIC3.3□□□□□ -1.88
RLIMQ9NVW2 RNU1-140P-201ENST00000365040 165 ntBASIC3.3□□□□□ -1.88
RLIMQ9NVW2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RLIMQ9NVW2 Y_RNA.428-201ENST00000384078 102 ntBASIC3.3□□□□□ -1.88
RLIMQ9NVW2 SNORA41-201ENST00000384675 132 ntBASIC3.3□□□□□ -1.88
RLIMQ9NVW2 RNU2-49P-201ENST00000410666 184 ntBASIC3.3□□□□□ -1.88
RLIMQ9NVW2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.3□□□□□ -1.88
RLIMQ9NVW2 RPS15AP5-201ENST00000436276 388 ntBASIC3.3□□□□□ -1.88
RLIMQ9NVW2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.3□□□□□ -1.88
RLIMQ9NVW2 AC022447.4-201ENST00000504053 364 ntBASIC3.3□□□□□ -1.88
RLIMQ9NVW2 AC105758.1-201ENST00000506038 399 ntBASIC3.3□□□□□ -1.88
RLIMQ9NVW2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.3□□□□□ -1.88
RLIMQ9NVW2 AC006199.1-201ENST00000548728 219 ntBASIC3.3□□□□□ -1.88
RLIMQ9NVW2 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.3□□□□□ -1.88
RLIMQ9NVW2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.3□□□□□ -1.88
RLIMQ9NVW2 AL158827.2-201ENST00000602494 330 ntBASIC3.3□□□□□ -1.88
RLIMQ9NVW2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.3□□□□□ -1.88
RLIMQ9NVW2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.3□□□□□ -1.88
RLIMQ9NVW2 AL691447.3-201ENST00000635020 330 ntBASIC3.3□□□□□ -1.88
RLIMQ9NVW2 AC241585.2-209ENST00000638217 143 ntBASIC3.3□□□□□ -1.88
RLIMQ9NVW2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RLIMQ9NVW2 AC106871.1-201ENST00000568324 3102 ntBASIC3.3□□□□□ -1.88
RLIMQ9NVW2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.3□□□□□ -1.88
RLIMQ9NVW2 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
RLIMQ9NVW2 CDC27P3-201ENST00000635418 1910 ntBASIC3.29□□□□□ -1.88
RLIMQ9NVW2 RNU6-227P-201ENST00000362865 103 ntBASIC3.29□□□□□ -1.88
RLIMQ9NVW2 RNA5SP51-201ENST00000364750 119 ntBASIC3.29□□□□□ -1.88
RLIMQ9NVW2 RNU6-596P-201ENST00000365395 98 ntBASIC3.29□□□□□ -1.88
RLIMQ9NVW2 RNU6-639P-201ENST00000384074 107 ntBASIC3.29□□□□□ -1.88
RLIMQ9NVW2 AL591034.2-201ENST00000402839 359 ntBASIC3.29□□□□□ -1.88
RLIMQ9NVW2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.29□□□□□ -1.88
RLIMQ9NVW2 MCFD2P1-201ENST00000417812 300 ntBASIC3.29□□□□□ -1.88
RLIMQ9NVW2 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.29□□□□□ -1.88
RLIMQ9NVW2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.29□□□□□ -1.88
RLIMQ9NVW2 MRPS18CP6-201ENST00000423587 223 ntBASIC3.29□□□□□ -1.88
RLIMQ9NVW2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.29□□□□□ -1.88
RLIMQ9NVW2 AC011816.1-201ENST00000441346 546 ntBASIC3.29□□□□□ -1.88
RLIMQ9NVW2 AC010401.1-201ENST00000463867 348 ntBASIC3.29□□□□□ -1.88
RLIMQ9NVW2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.29□□□□□ -1.88
RLIMQ9NVW2 SNORD116.3-201ENST00000517176 78 ntBASIC3.29□□□□□ -1.88
RLIMQ9NVW2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.29□□□□□ -1.88
RLIMQ9NVW2 AC026333.2-201ENST00000542164 106 ntBASIC3.29□□□□□ -1.88
RLIMQ9NVW2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.29□□□□□ -1.88
RLIMQ9NVW2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.29□□□□□ -1.88
RLIMQ9NVW2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.29□□□□□ -1.88
RLIMQ9NVW2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.29□□□□□ -1.88
RLIMQ9NVW2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.29□□□□□ -1.88
RLIMQ9NVW2 VN1R85P-201ENST00000601587 426 ntBASIC3.29□□□□□ -1.88
RLIMQ9NVW2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms