Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC016831.2-201ENST00000417179 352 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.64□□□□□ -2.15
TREX1Q9NSU2 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.64□□□□□ -2.15
TREX1Q9NSU2 AL353777.1-201ENST00000425552 326 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.64□□□□□ -2.15
TREX1Q9NSU2 RPL37P21-201ENST00000435890 276 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 GDI2P2-201ENST00000445131 608 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 AL583843.1-201ENST00000456070 346 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 AC119751.4-201ENST00000507498 357 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.64□□□□□ -2.15
TREX1Q9NSU2 RNU6-201P-201ENST00000517100 61 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 AC011979.2-201ENST00000527568 352 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 AC135279.1-201ENST00000543493 504 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.64□□□□□ -2.15
TREX1Q9NSU2 AC090888.2-201ENST00000559765 1144 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 AC092325.1-201ENST00000566449 554 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 MTND1P8-201ENST00000571424 950 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 MIR3122-201ENST00000577243 73 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 MIR4769-201ENST00000584126 77 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.64□□□□□ -2.15
TREX1Q9NSU2 RPL30P11-203ENST00000598995 310 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 AL713866.2-201ENST00000603579 219 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 SEPT7P9-203ENST00000604116 343 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 AC144521.1-201ENST00000607148 956 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 AC093788.1-201ENST00000609356 927 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 AC068944.2-201ENST00000610373 403 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 MIR8081-201ENST00000611533 95 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
TREX1Q9NSU2 ZNF72P-201ENST00000425869 1908 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 RNU5E-1-201ENST00000362477 120 ntBASIC1.63□□□□□ -2.15
TREX1Q9NSU2 RNU6-395P-201ENST00000365662 106 ntBASIC1.63□□□□□ -2.15
TREX1Q9NSU2 RNA5SP212-201ENST00000391223 107 ntBASIC1.63□□□□□ -2.15
TREX1Q9NSU2 AL591034.2-201ENST00000402839 359 ntBASIC1.63□□□□□ -2.15
TREX1Q9NSU2 AC127391.1-201ENST00000411737 98 ntBASIC1.63□□□□□ -2.15
TREX1Q9NSU2 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.63□□□□□ -2.15
TREX1Q9NSU2 RPL23AP30-201ENST00000432419 501 ntBASIC1.63□□□□□ -2.15
TREX1Q9NSU2 AL354941.1-201ENST00000438600 464 ntBASIC1.63□□□□□ -2.15
TREX1Q9NSU2 AC007677.1-201ENST00000445757 515 ntBASIC1.63□□□□□ -2.15
TREX1Q9NSU2 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.63□□□□□ -2.15
TREX1Q9NSU2 snoU109.2-201ENST00000459316 135 ntBASIC1.63□□□□□ -2.15
TREX1Q9NSU2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.63□□□□□ -2.15
TREX1Q9NSU2 AC022616.6-201ENST00000520479 119 ntBASIC1.63□□□□□ -2.15
TREX1Q9NSU2 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.63□□□□□ -2.15
TREX1Q9NSU2 OR5B19P-201ENST00000531766 928 ntBASIC1.63□□□□□ -2.15
TREX1Q9NSU2 AC233702.2-202ENST00000562547 291 ntBASIC1.63□□□□□ -2.15
TREX1Q9NSU2 TMF1P1-201ENST00000576058 373 ntBASIC1.63□□□□□ -2.15
TREX1Q9NSU2 AL158032.1-201ENST00000605401 106 ntBASIC1.63□□□□□ -2.15
TREX1Q9NSU2 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.63□□□□□ -2.15
TREX1Q9NSU2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.63□□□□□ -2.15
TREX1Q9NSU2 AC024940.5-201ENST00000622889 474 ntBASIC1.63□□□□□ -2.15
TREX1Q9NSU2 AC092656.1-203ENST00000624134 423 ntBASIC1.63□□□□□ -2.15
TREX1Q9NSU2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TREX1Q9NSU2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TREX1Q9NSU2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
TREX1Q9NSU2 RBBP8P1-201ENST00000449447 1844 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 Y_RNA.97-201ENST00000363094 102 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 RNU1-23P-201ENST00000363361 144 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 RNU6-960P-201ENST00000364056 120 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 RNU4-42P-201ENST00000364738 142 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 MIR513B-201ENST00000385136 84 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 SNORA26.9-201ENST00000391322 122 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 AL033519.2-201ENST00000403958 392 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 RN7SKP101-201ENST00000411376 320 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 RPS27AP14-201ENST00000422868 454 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.62□□□□□ -2.15
TREX1Q9NSU2 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.62□□□□□ -2.15
TREX1Q9NSU2 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.62□□□□□ -2.15
TREX1Q9NSU2 AL008629.1-201ENST00000438615 184 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.62□□□□□ -2.15
TREX1Q9NSU2 AC003071.1-201ENST00000451219 789 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.62□□□□□ -2.15
TREX1Q9NSU2 AC087884.1-201ENST00000469738 328 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 MED28P2-201ENST00000475771 317 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TREX1Q9NSU2 AC108210.2-201ENST00000503681 201 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 AF131216.2-201ENST00000512316 564 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.62□□□□□ -2.15
TREX1Q9NSU2 SNORA48.11-201ENST00000517015 89 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.62□□□□□ -2.15
TREX1Q9NSU2 MIR3683-201ENST00000580847 82 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 MIR3118-1-201ENST00000581787 76 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 MIR4999-201ENST00000585029 91 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 BNIP3P25-201ENST00000596023 559 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 AC073410.2-201ENST00000603240 332 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 AC174048.1-201ENST00000603389 144 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.62□□□□□ -2.15
TREX1Q9NSU2 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TREX1Q9NSU2 AL445523.1-201ENST00000451184 1362 ntBASIC1.61□□□□□ -2.15
TREX1Q9NSU2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.61□□□□□ -2.15
TREX1Q9NSU2 MIR518A2-201ENST00000384966 87 ntBASIC1.61□□□□□ -2.15
TREX1Q9NSU2 MIR95-201ENST00000385072 81 ntBASIC1.61□□□□□ -2.15
TREX1Q9NSU2 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.61□□□□□ -2.15
TREX1Q9NSU2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.61□□□□□ -2.15
TREX1Q9NSU2 AC118469.1-201ENST00000442943 488 ntBASIC1.61□□□□□ -2.15
TREX1Q9NSU2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.61□□□□□ -2.15
TREX1Q9NSU2 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.61□□□□□ -2.15
TREX1Q9NSU2 RPL7P43-201ENST00000478876 753 ntBASIC1.61□□□□□ -2.15
TREX1Q9NSU2 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms