Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 MIR3942-201ENST00000585264 109 ntBASIC3.38□□□□□ -1.87
VPS45Q9NRW7 RPL23AP78-201ENST00000599928 470 ntBASIC3.38□□□□□ -1.87
VPS45Q9NRW7 AC093732.2-201ENST00000607950 274 ntBASIC3.38□□□□□ -1.87
VPS45Q9NRW7 uc_338.15-201ENST00000615470 191 ntBASIC3.38□□□□□ -1.87
VPS45Q9NRW7 AC073476.4-201ENST00000628409 72 ntBASIC3.38□□□□□ -1.87
VPS45Q9NRW7 AL133216.2-202ENST00000634512 349 ntBASIC3.38□□□□□ -1.87
VPS45Q9NRW7 MIR1302-1-201ENST00000637932 143 ntBASIC3.38□□□□□ -1.87
VPS45Q9NRW7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS45Q9NRW7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS45Q9NRW7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.37□□□□□ -1.87
VPS45Q9NRW7 AC093010.3-201ENST00000570269 15214 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS45Q9NRW7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS45Q9NRW7 Y_RNA.33-201ENST00000362591 102 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 RNU6-1252P-201ENST00000363054 104 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 SNORA5B-201ENST00000363786 132 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS45Q9NRW7 CD24P4-201ENST00000382840 243 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 SNORA48.8-201ENST00000391324 134 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 MIR450B-201ENST00000401182 78 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 SKA2P1-201ENST00000425592 390 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 AC098614.2-201ENST00000426040 255 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 RPS27AP10-201ENST00000496103 208 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.37□□□□□ -1.87
VPS45Q9NRW7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.37□□□□□ -1.87
VPS45Q9NRW7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.37□□□□□ -1.87
VPS45Q9NRW7 RNU6-277P-201ENST00000516272 106 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 RNU6-1069P-201ENST00000516612 133 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 SNORA64.4-201ENST00000516632 81 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 AC022080.3-201ENST00000544433 482 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 AC073539.2-201ENST00000597113 165 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 AC006023.1-201ENST00000603944 259 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 AL121757.2-201ENST00000611223 313 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 uc_338.1-201ENST00000612113 180 ntBASIC3.37□□□□□ -1.87
VPS45Q9NRW7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS45Q9NRW7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VPS45Q9NRW7 MIR148B-201ENST00000362252 99 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 Y_RNA.212-201ENST00000364177 102 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 RNU4-76P-201ENST00000364509 141 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 Y_RNA.813-201ENST00000364639 102 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 VN1R36P-201ENST00000414936 291 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS45Q9NRW7 HMGN1P18-201ENST00000457642 277 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AC109925.1-201ENST00000478069 331 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 RPL7P43-201ENST00000478876 753 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AC006445.1-201ENST00000491925 405 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS45Q9NRW7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS45Q9NRW7 SNORD19.2-201ENST00000516978 73 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AC104027.1-201ENST00000521887 300 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AC093027.1-201ENST00000546698 429 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS45Q9NRW7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AC025281.1-201ENST00000567026 265 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AL355375.2-201ENST00000574825 175 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS45Q9NRW7 MIR3672-201ENST00000584290 82 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 MIR5692C1-201ENST00000585309 91 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 RPL12P50-201ENST00000603116 116 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AL133393.1-201ENST00000603277 287 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 AC007938.3-201ENST00000604965 623 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS45Q9NRW7 SNORA50A-202ENST00000629536 136 ntBASIC3.36□□□□□ -1.87
VPS45Q9NRW7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS45Q9NRW7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS45Q9NRW7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS45Q9NRW7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 RNU4-79P-201ENST00000362764 141 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 Y_RNA.474-201ENST00000384341 102 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 AL031121.1-201ENST00000406553 254 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 RNU6-1025P-201ENST00000410629 104 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 RNU6-607P-201ENST00000411283 108 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 RPS20P15-201ENST00000412792 311 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 AL353621.1-201ENST00000418219 243 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 AC025750.2-201ENST00000442609 450 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 HMGB1P30-201ENST00000492455 606 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 AC022493.1-201ENST00000492984 337 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 MTND4LP22-201ENST00000508209 276 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 MTND3P25-201ENST00000509243 135 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 AC113155.1-201ENST00000511141 769 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 RNU6-566P-201ENST00000516790 107 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 RNU6-1088P-201ENST00000516850 104 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms