Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RNU6-927P-201ENST00000516199 100 ntBASIC0.88□□□□□ -2.27
KIAA1549Q9HCM3 RNU6-678P-201ENST00000516832 109 ntBASIC0.88□□□□□ -2.27
KIAA1549Q9HCM3 AC104417.1-201ENST00000523974 751 ntBASIC0.88□□□□□ -2.27
KIAA1549Q9HCM3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.88□□□□□ -2.27
KIAA1549Q9HCM3 MIR6734-201ENST00000621166 68 ntBASIC0.88□□□□□ -2.27
KIAA1549Q9HCM3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.88□□□□□ -2.27
KIAA1549Q9HCM3 ISCA1P1-201ENST00000426679 387 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 MTCO3P43-201ENST00000440974 771 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 GDI2P2-201ENST00000445131 608 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 MEMO1P3-201ENST00000459811 302 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 RPL7P43-201ENST00000478876 753 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 DEFB108E-201ENST00000524692 240 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 AC098483.2-201ENST00000603158 454 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 AC091152.3-201ENST00000604227 325 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 AP000776.1-201ENST00000530032 1663 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 AC092447.10-201ENST00000620607 1652 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 AC138393.1-203ENST00000327086 343 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 RNU6-792P-201ENST00000363490 107 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 MIR520E-201ENST00000384867 87 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 RNU6-278P-201ENST00000390945 109 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 BTF3L4P3-201ENST00000418879 476 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 TIMM9P2-201ENST00000419324 266 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 UBE2V1P4-201ENST00000425374 344 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 RPS27P16-201ENST00000425758 201 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 AC007395.1-201ENST00000451333 677 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 FCF1P6-201ENST00000456841 595 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 OR2A41P-201ENST00000473586 105 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 AC021382.1-201ENST00000483523 359 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 AC139453.3-201ENST00000493276 369 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 ACA59.2-201ENST00000517061 156 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 MIR4714-201ENST00000580728 77 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 AL163152.1-201ENST00000642001 374 ntBASIC0.87□□□□□ -2.27
KIAA1549Q9HCM3 SNORD115-3-201ENST00000363100 82 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 RNU6-207P-201ENST00000384137 107 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 SRIP3-201ENST00000413200 219 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 RPS27P1-201ENST00000450552 247 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 AC108059.3-201ENST00000456388 214 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 TPT1P8-201ENST00000510120 555 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 CYCSP27-201ENST00000527643 293 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 MRPS36P5-201ENST00000551909 298 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 IMMP1LP2-201ENST00000552954 492 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 CYP3A137P-201ENST00000562436 69 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 AF038458.1-201ENST00000588406 262 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 AL355598.1-201ENST00000604169 202 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 AC090970.3-201ENST00000612566 866 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 AC008759.3-201ENST00000613300 508 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 AC078880.5-201ENST00000617845 421 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 MIR6788-201ENST00000618842 66 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 U1.36-201ENST00000620684 176 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 PCMTD1P7-201ENST00000634506 357 ntBASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.86□□□□□ -2.27
KIAA1549Q9HCM3 RNU6-289P-201ENST00000364093 107 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 RNU6-338P-201ENST00000383888 105 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 RNU6-160P-201ENST00000384591 107 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 AL022400.1-201ENST00000423946 935 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 RSL24D1P8-201ENST00000434442 492 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 AC005094.1-201ENST00000440420 368 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 PAXBP1P1-201ENST00000449315 447 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 AC092001.1-201ENST00000453012 261 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 CECR9-201ENST00000453421 199 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 AC010631.1-201ENST00000474150 156 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 AC109927.2-201ENST00000506416 303 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 RNU6-405P-201ENST00000516637 110 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 RNU6-467P-201ENST00000517027 110 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 AL391646.1-201ENST00000603860 190 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 AL022345.1-201ENST00000607292 135 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 AC138627.2-201ENST00000624202 601 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 FARSBP1-201ENST00000435808 1778 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 Y_RNA.234-201ENST00000364409 97 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 RNU6-701P-201ENST00000384059 107 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 MIR1267-201ENST00000408723 78 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms