| HOXD1 | Q9GZZ0 | NUTF2P8-201 | ENST00000604593 | 363 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | RMST_3.1-201 | ENST00000611651 | 109 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | DISC2.1-201 | ENST00000612827 | 205 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC011890.2-201 | ENST00000613393 | 294 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | U6.42-201 | ENST00000618440 | 107 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC007405.1-203 | ENST00000623667 | 932 nt | TSL 5 BASIC | 2.49 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AP003400.5-201 | ENST00000624827 | 617 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AL137790.1-201 | ENST00000634283 | 177 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC093536.2-201 | ENST00000565257 | 1406 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC026241.1-201 | ENST00000517873 | 2142 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | LUZP4-201 | ENST00000371920 | 1701 nt | APPRIS P2 TSL 1 (best) BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | N4BP2L2-205 | ENST00000446957 | 2071 nt | TSL 5 BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | ARHGAP11A-207 | ENST00000565905 | 3318 nt | TSL 2 BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AGTPBP1-205 | ENST00000376083 | 4208 nt | APPRIS P1 TSL 1 (best) BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | DEFB107A-201 | ENST00000335021 | 389 nt | APPRIS P1 TSL 1 (best) BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | DEFB107B-201 | ENST00000355602 | 389 nt | APPRIS P1 TSL 1 (best) BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | RNU6-166P-201 | ENST00000384371 | 107 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | Y_RNA.573-201 | ENST00000384763 | 105 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | RNU6-193P-201 | ENST00000410977 | 107 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC023141.4-201 | ENST00000412031 | 328 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC010967.2-201 | ENST00000418451 | 333 nt | TSL 2 BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | BPY2DP-201 | ENST00000422208 | 265 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | RPL23AP83-201 | ENST00000434984 | 473 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AL078601.1-201 | ENST00000444542 | 271 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AL139260.1-202 | ENST00000456813 | 441 nt | TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AL024497.2-201 | ENST00000457081 | 317 nt | TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | RNU7-23P-201 | ENST00000459465 | 62 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | MTCO3P38-201 | ENST00000468910 | 766 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | RPL21P99-201 | ENST00000480369 | 423 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | PLCXD2-AS1-201 | ENST00000493131 | 491 nt | TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC114786.4-201 | ENST00000508771 | 728 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC008716.1-201 | ENST00000511084 | 513 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | RNU2-69P-201 | ENST00000516061 | 100 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | SNORD60.2-201 | ENST00000516883 | 86 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | IGHVII-62-1-201 | ENST00000519283 | 235 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AP001189.6-201 | ENST00000528781 | 831 nt | TSL 1 (best) BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC025030.2-201 | ENST00000552558 | 567 nt | TSL 2 BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC012100.2-201 | ENST00000558317 | 304 nt | TSL 5 BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | CYCSP39-201 | ENST00000565821 | 309 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC009163.5-201 | ENST00000575421 | 637 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | MIR5194-201 | ENST00000582634 | 120 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AL355598.1-201 | ENST00000604169 | 202 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | CYP3A43-217 | ENST00000631161 | 328 nt | TSL 5 BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | MIR3662-201 | ENST00000637030 | 95 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | OR4G1P-203 | ENST00000641984 | 1631 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | TAB3-205 | ENST00000378933 | 6671 nt | APPRIS P1 TSL 1 (best) BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC010680.1-201 | ENST00000590024 | 3590 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | TXLNGY-201 | ENST00000253320 | 7299 nt | TSL 2 BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | OR13G1-202 | ENST00000642119 | 2568 nt | APPRIS P1 BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | TMPRSS11A-201 | ENST00000334830 | 3054 nt | APPRIS P3 TSL 2 BASIC | 2.48 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | ECT2-211 | ENST00000441497 | 2825 nt | APPRIS P2 TSL 1 (best) BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | EDDM3A-201 | ENST00000326842 | 927 nt | APPRIS P1 TSL 1 (best) BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | RNA5SP139-201 | ENST00000364340 | 117 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | RNU6-7-201 | ENST00000364784 | 107 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | RNU6-384P-201 | ENST00000364900 | 104 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | RNU1-100P-201 | ENST00000365255 | 165 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | RNU6-8-201 | ENST00000365467 | 107 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | Y_RNA.378-201 | ENST00000365652 | 113 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | OR51A4-201 | ENST00000380373 | 1002 nt | APPRIS P1 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | RNU6-434P-201 | ENST00000384376 | 107 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | SNORA80E-201 | ENST00000384744 | 137 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | MIR483-201 | ENST00000385070 | 76 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | Y_RNA.623-201 | ENST00000411128 | 95 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC096664.2-201 | ENST00000411843 | 406 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | NDUFS5P4-201 | ENST00000412983 | 318 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | MTND1P23-201 | ENST00000416931 | 372 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | PGBD4P6-201 | ENST00000421501 | 610 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | MRPS10P2-201 | ENST00000431226 | 381 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AL451060.1-203 | ENST00000431307 | 362 nt | TSL 3 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC105272.1-201 | ENST00000438604 | 198 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | LINC02041-201 | ENST00000440726 | 246 nt | TSL 5 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | PRPS1P1-201 | ENST00000445305 | 876 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | FGF7P6-202 | ENST00000451282 | 293 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | MTATP6P7-201 | ENST00000453315 | 681 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AL353780.1-201 | ENST00000455583 | 458 nt | TSL 2 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC121764.3-201 | ENST00000465946 | 384 nt | TSL 2 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC097375.2-201 | ENST00000510416 | 579 nt | TSL 5 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AL117351.2-201 | ENST00000513571 | 157 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | LRRC34P2-201 | ENST00000514850 | 553 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | RNA5SP82-201 | ENST00000516707 | 92 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | MIR4782-201 | ENST00000577987 | 79 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AL645944.1-201 | ENST00000603857 | 493 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC005000.2-201 | ENST00000605468 | 310 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC104458.1-201 | ENST00000608243 | 463 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | DLEU2_6.1-201 | ENST00000610536 | 112 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | AC002553.4-201 | ENST00000616896 | 331 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | HIKESHI-208 | ENST00000618164 | 499 nt | TSL 5 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | HOTTIP_4.1-201 | ENST00000618195 | 165 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | KLRA1P-202 | ENST00000510134 | 1410 nt | TSL 5 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | RGS18-201 | ENST00000367460 | 2150 nt | APPRIS P1 TSL 1 (best) BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | KBTBD3-207 | ENST00000534815 | 3396 nt | TSL 5 BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | MAPK10-266 | ENST00000641066 | 6555 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | TMEM232-201 | ENST00000455884 | 2501 nt | APPRIS P2 TSL 2 BASIC | 2.46 | □□□□□ -2.01 | | |
| HOXD1 | Q9GZZ0 | ATP11C-201 | ENST00000327569 | 6115 nt | APPRIS P3 TSL 1 (best) BASIC | 2.46 | □□□□□ -2.02 | | |
| HOXD1 | Q9GZZ0 | CYLC2-201 | ENST00000374798 | 2171 nt | APPRIS P1 TSL 1 (best) BASIC | 2.46 | □□□□□ -2.02 | | |
| HOXD1 | Q9GZZ0 | AC004520.1-201 | ENST00000608362 | 1413 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOXD1 | Q9GZZ0 | MIR412-201 | ENST00000362142 | 91 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HOXD1 | Q9GZZ0 | S100A12-201 | ENST00000368737 | 518 nt | APPRIS P1 TSL 1 (best) BASIC | 2.46 | □□□□□ -2.02 | | |
| HOXD1 | Q9GZZ0 | EQTN-201 | ENST00000380031 | 725 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.46 | □□□□□ -2.02 | | |
| HOXD1 | Q9GZZ0 | MIR10A-201 | ENST00000385043 | 110 nt | BASIC | 2.46 | □□□□□ -2.02 | | |