Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 RNU6-512P-201ENST00000364438 103 ntBASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 RNU6-338P-201ENST00000383888 105 ntBASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 SNORA40.6-201ENST00000391153 128 ntBASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 RNU6-955P-201ENST00000410497 104 ntBASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 AL022400.1-201ENST00000423946 935 ntBASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 SNRPEP7-201ENST00000438350 220 ntBASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 RPS29P1-201ENST00000465274 159 ntBASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 AC139453.3-201ENST00000493276 369 ntBASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 RNU6-586P-201ENST00000517265 104 ntBASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 RPL21P5-201ENST00000554662 472 ntBASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 MIR3660-201ENST00000584845 100 ntBASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 AC090186.1-201ENST00000605991 572 ntBASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 AC107952.2-201ENST00000606048 486 ntBASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 U6.99-201ENST00000637524 83 ntBASIC1.49□□□□□ -2.17
UPF3BQ9BZI7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 RNU2-48P-201ENST00000410694 191 ntBASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 RPS12P24-201ENST00000412619 387 ntBASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 AL121601.2-201ENST00000438019 707 ntBASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 ATP5J2P3-201ENST00000451550 258 ntBASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 RNU7-59P-201ENST00000459101 61 ntBASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 RPF2P2-201ENST00000504693 896 ntBASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 RNU6-667P-201ENST00000517186 102 ntBASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 CYCSP27-201ENST00000527643 293 ntBASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 AC005832.3-201ENST00000537929 631 ntBASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 AC098614.4-201ENST00000607601 462 ntBASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.48□□□□□ -2.17
UPF3BQ9BZI7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 RNU6-1284P-201ENST00000363701 100 ntBASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 MIR518D-201ENST00000385014 87 ntBASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 AC015922.2-201ENST00000435593 184 ntBASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 AP000949.1-201ENST00000438328 629 ntBASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 AC114801.2-201ENST00000503825 781 ntBASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 AC021146.8-201ENST00000507455 733 ntBASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 AC104072.1-201ENST00000568817 668 ntBASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 AC016925.2-201ENST00000605108 242 ntBASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 AC091965.5-201ENST00000624785 342 ntBASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 PCMTD1P7-201ENST00000634506 357 ntBASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.47□□□□□ -2.17
UPF3BQ9BZI7 RNU6-1010P-201ENST00000362757 107 ntBASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 SNORD114-19-201ENST00000363072 75 ntBASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 Y_RNA.393-201ENST00000383936 102 ntBASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 SDAD1P3-201ENST00000427380 333 ntBASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 AC005094.1-201ENST00000440420 368 ntBASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 AC109927.2-201ENST00000506416 303 ntBASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 MTCYBP43-201ENST00000513621 740 ntBASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 AC084364.2-201ENST00000546924 395 ntBASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 RPL30P11-203ENST00000598995 310 ntBASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 DPPA3P3-201ENST00000603842 430 ntBASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 PRR13P7-201ENST00000605538 430 ntBASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 AL050343.2-201ENST00000607338 280 ntBASIC1.46□□□□□ -2.18
UPF3BQ9BZI7 RNU6-529P-201ENST00000363383 104 ntBASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 snoZ40.1-201ENST00000364540 72 ntBASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 MIR548J-201ENST00000408833 112 ntBASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 AL953862.1-201ENST00000423016 168 ntBASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 MTCO2P1-201ENST00000424648 477 ntBASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 AL365400.1-201ENST00000431854 640 ntBASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 COX6CP14-201ENST00000469580 174 ntBASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 AC098862.1-201ENST00000504991 413 ntBASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 AP004247.1-201ENST00000531556 1289 ntBASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 AP000763.2-201ENST00000540641 163 ntBASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 CR383656.8-201ENST00000549046 145 ntBASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 AC060771.1-201ENST00000582031 164 ntBASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 AL391646.1-201ENST00000603860 190 ntBASIC1.45□□□□□ -2.18
UPF3BQ9BZI7 AC018638.7-201ENST00000605836 1114 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms