Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.35□□□□□ -2.03
LITAFQ99732 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.35□□□□□ -2.03
LITAFQ99732 RNU6-764P-201ENST00000516396 105 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 RNU4-77P-201ENST00000516692 156 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.35□□□□□ -2.03
LITAFQ99732 GNAI2P1-201ENST00000541815 315 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.35□□□□□ -2.03
LITAFQ99732 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC2.35□□□□□ -2.03
LITAFQ99732 AP000942.4-201ENST00000604811 241 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.35□□□□□ -2.03
LITAFQ99732 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.35□□□□□ -2.03
LITAFQ99732 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
LITAFQ99732 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.35□□□□□ -2.03
LITAFQ99732 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LITAFQ99732 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
LITAFQ99732 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LITAFQ99732 Y_RNA.126-201ENST00000363382 111 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 RNA5SP447-201ENST00000363749 119 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 RNU6-595P-201ENST00000363944 107 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 Y_RNA.485-201ENST00000384395 102 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 PTMAP5-201ENST00000393073 333 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 RPL21P3-201ENST00000395517 478 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LITAFQ99732 ELOCP19-201ENST00000411919 318 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.34□□□□□ -2.03
LITAFQ99732 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.34□□□□□ -2.03
LITAFQ99732 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.34□□□□□ -2.03
LITAFQ99732 MTCYBP10-201ENST00000424905 650 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 RPL7P2-201ENST00000427639 268 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 DNAJC19P7-201ENST00000428811 344 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LITAFQ99732 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.34□□□□□ -2.03
LITAFQ99732 HMGN2P10-201ENST00000448085 265 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.34□□□□□ -2.03
LITAFQ99732 AC079354.2-201ENST00000453523 154 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
LITAFQ99732 snoU13.1-201ENST00000459157 104 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 snoU13.28-201ENST00000459235 104 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 AC146507.2-201ENST00000460608 476 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 AC015911.1-201ENST00000495111 156 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 SCARNA14-201ENST00000516903 136 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 RN7SKP92-201ENST00000517266 244 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LITAFQ99732 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.34□□□□□ -2.03
LITAFQ99732 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.34□□□□□ -2.03
LITAFQ99732 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
LITAFQ99732 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.34□□□□□ -2.03
LITAFQ99732 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.34□□□□□ -2.03
LITAFQ99732 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.34□□□□□ -2.03
LITAFQ99732 MIR5701-3-201ENST00000578890 82 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 MIR4715-201ENST00000584117 79 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 MIR5701-1-201ENST00000585138 82 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 AC024220.1-201ENST00000603675 484 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 AC104695.3-201ENST00000604052 296 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 SNORD58B-201ENST00000607313 66 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 AC009318.2-201ENST00000610917 651 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 MIR5701-2-201ENST00000615634 82 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.34□□□□□ -2.03
LITAFQ99732 AF117829.1-206ENST00000621883 3802 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 AC097372.5-201ENST00000623665 376 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 AL078596.1-201ENST00000624856 447 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 AL606534.2-204ENST00000635008 178 ntBASIC2.34□□□□□ -2.03
LITAFQ99732 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
LITAFQ99732 AC091812.1-201ENST00000432235 1948 ntBASIC2.34□□□□□ -2.04
LITAFQ99732 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.34□□□□□ -2.04
LITAFQ99732 AC008264.2-201ENST00000610193 3731 ntBASIC2.34□□□□□ -2.04
LITAFQ99732 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LITAFQ99732 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LITAFQ99732 AF127577.6-201ENST00000623352 2191 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
LITAFQ99732 AC093831.2-201ENST00000624393 3427 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 Y_RNA.39-201ENST00000362620 98 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 RNU6-1309P-201ENST00000363305 108 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 Y_RNA.144-201ENST00000363521 113 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 RNU6-1280P-201ENST00000365211 107 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 RNU6-784P-201ENST00000384330 106 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 SNORD116-20-201ENST00000384529 92 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
LITAFQ99732 AP000567.1-201ENST00000406413 156 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 FTH1P15-201ENST00000406984 280 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 AP000275.1-201ENST00000411943 390 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.33□□□□□ -2.04
LITAFQ99732 AL356968.1-201ENST00000416622 474 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 AC005300.1-201ENST00000428401 373 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.33□□□□□ -2.04
LITAFQ99732 AL591043.1-201ENST00000432461 424 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 CYCSP32-201ENST00000440548 321 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 ATP6V0E1P2-201ENST00000441771 245 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 AC124916.1-201ENST00000444020 547 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LITAFQ99732 AL353752.1-201ENST00000454946 260 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 HMGN2P7-201ENST00000456186 273 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 RPL23AP62-201ENST00000463396 453 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 RPL23AP67-201ENST00000465341 474 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.33□□□□□ -2.04
LITAFQ99732 SNRPGP3-201ENST00000469405 227 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 UQCRHP4-201ENST00000471686 272 ntBASIC2.33□□□□□ -2.04
LITAFQ99732 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.33□□□□□ -2.04
LITAFQ99732 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms