Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 RNU6-927P-201ENST00000516199 100 ntBASIC1.3□□□□□ -2.2
SCAF11Q99590 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.3□□□□□ -2.2
SCAF11Q99590 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.3□□□□□ -2.2
SCAF11Q99590 MIR3126-201ENST00000577443 74 ntBASIC1.3□□□□□ -2.2
SCAF11Q99590 MIR4529-201ENST00000578110 78 ntBASIC1.3□□□□□ -2.2
SCAF11Q99590 AC091152.3-201ENST00000604227 325 ntBASIC1.3□□□□□ -2.2
SCAF11Q99590 FAM71BP1-201ENST00000604431 523 ntBASIC1.3□□□□□ -2.2
SCAF11Q99590 AC106052.1-201ENST00000608029 497 ntBASIC1.3□□□□□ -2.2
SCAF11Q99590 AC104763.3-201ENST00000613765 618 ntBASIC1.3□□□□□ -2.2
SCAF11Q99590 AL512506.1-201ENST00000613918 449 ntBASIC1.3□□□□□ -2.2
SCAF11Q99590 U4atac.1-201ENST00000618345 95 ntBASIC1.3□□□□□ -2.2
SCAF11Q99590 AC024581.2-201ENST00000619986 252 ntBASIC1.3□□□□□ -2.2
SCAF11Q99590 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SCAF11Q99590 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SCAF11Q99590 RPS24P7-201ENST00000416921 246 ntBASIC1.29□□□□□ -2.2
SCAF11Q99590 MRPL35P3-201ENST00000421557 364 ntBASIC1.29□□□□□ -2.2
SCAF11Q99590 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SCAF11Q99590 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.29□□□□□ -2.2
SCAF11Q99590 RPL7P34-201ENST00000433316 712 ntBASIC1.29□□□□□ -2.2
SCAF11Q99590 AL161651.1-201ENST00000440882 223 ntBASIC1.29□□□□□ -2.2
SCAF11Q99590 AC110760.3-202ENST00000515177 371 ntBASIC1.29□□□□□ -2.2
SCAF11Q99590 DEFB108E-201ENST00000524692 240 ntBASIC1.29□□□□□ -2.2
SCAF11Q99590 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.29□□□□□ -2.2
SCAF11Q99590 AP001269.3-201ENST00000588718 329 ntBASIC1.29□□□□□ -2.2
SCAF11Q99590 AL138963.2-201ENST00000605137 226 ntBASIC1.29□□□□□ -2.2
SCAF11Q99590 AC099785.1-201ENST00000605697 437 ntBASIC1.29□□□□□ -2.2
SCAF11Q99590 AC007038.2-201ENST00000608095 740 ntBASIC1.29□□□□□ -2.2
SCAF11Q99590 AC011939.3-201ENST00000613686 466 ntBASIC1.29□□□□□ -2.2
SCAF11Q99590 AC023158.2-201ENST00000614876 543 ntBASIC1.29□□□□□ -2.2
SCAF11Q99590 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SCAF11Q99590 RNU6-1167P-201ENST00000363227 94 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 snoZ40.1-201ENST00000364540 72 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SCAF11Q99590 RNU6-17P-201ENST00000384245 107 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 RNU6-18P-201ENST00000384527 107 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 RNA5SP193-201ENST00000410353 107 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 EDDM3CP-201ENST00000415977 425 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 TIMM9P2-201ENST00000419324 266 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.28□□□□□ -2.2
SCAF11Q99590 AC010153.1-201ENST00000432862 727 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 MTCO3P45-201ENST00000443036 613 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 RPL23AP3-201ENST00000453844 468 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 AC104563.1-201ENST00000476147 376 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 RPL22P13-201ENST00000493291 347 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 AC021146.2-201ENST00000504736 556 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 AC008628.1-201ENST00000508663 265 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 AC087894.1-201ENST00000538359 518 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 AC006199.1-201ENST00000548728 219 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 AL109918.3-201ENST00000603072 338 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 DUSP12P1-201ENST00000612874 516 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.28□□□□□ -2.2
SCAF11Q99590 MIR5739-201ENST00000619803 80 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SCAF11Q99590 AP003400.5-201ENST00000624827 617 ntBASIC1.28□□□□□ -2.2
SCAF11Q99590 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
SCAF11Q99590 MIR147B-201ENST00000390185 80 ntBASIC1.27□□□□□ -2.21
SCAF11Q99590 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
SCAF11Q99590 RNU2-63P-201ENST00000410792 194 ntBASIC1.27□□□□□ -2.21
SCAF11Q99590 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.27□□□□□ -2.21
SCAF11Q99590 USP9YP26-201ENST00000421008 661 ntBASIC1.27□□□□□ -2.21
SCAF11Q99590 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.27□□□□□ -2.21
SCAF11Q99590 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
SCAF11Q99590 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.27□□□□□ -2.21
SCAF11Q99590 MTCO3P27-201ENST00000514397 196 ntBASIC1.27□□□□□ -2.21
SCAF11Q99590 RNU6-703P-201ENST00000516946 107 ntBASIC1.27□□□□□ -2.21
SCAF11Q99590 MRPS36P5-201ENST00000551909 298 ntBASIC1.27□□□□□ -2.21
SCAF11Q99590 AL132657.2-201ENST00000564417 358 ntBASIC1.27□□□□□ -2.21
SCAF11Q99590 AL512605.2-201ENST00000592972 256 ntBASIC1.27□□□□□ -2.21
SCAF11Q99590 AL021368.1-201ENST00000607490 540 ntBASIC1.27□□□□□ -2.21
SCAF11Q99590 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SCAF11Q99590 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.27□□□□□ -2.21
SCAF11Q99590 RNA5SP276-201ENST00000362580 94 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 USP9YP33-201ENST00000412220 421 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.26□□□□□ -2.21
SCAF11Q99590 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.26□□□□□ -2.21
SCAF11Q99590 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 GPM6BP2-201ENST00000432046 144 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 USP9YP35-201ENST00000435696 412 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.26□□□□□ -2.21
SCAF11Q99590 GPM6BP1-201ENST00000446387 144 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 AC020550.1-201ENST00000447385 163 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.26□□□□□ -2.21
SCAF11Q99590 AL441985.1-201ENST00000457727 251 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 AP001324.2-201ENST00000461163 319 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 AC010631.1-201ENST00000474150 156 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.26□□□□□ -2.21
SCAF11Q99590 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.26□□□□□ -2.21
SCAF11Q99590 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.26□□□□□ -2.21
SCAF11Q99590 RNU6-150P-201ENST00000516237 95 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 DEFB131D-201ENST00000526803 184 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 ROCK1P1-201ENST00000573767 549 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 MTCYBP22-201ENST00000603788 447 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 AP002802.2-201ENST00000605877 235 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.26□□□□□ -2.21
SCAF11Q99590 AC009233.1-201ENST00000616477 371 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 AP003485.1-201ENST00000625093 753 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 AC092447.10-201ENST00000620607 1652 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 AC008555.8-201ENST00000623602 2168 ntBASIC1.26□□□□□ -2.21
SCAF11Q99590 RNA5SP240-201ENST00000365355 128 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms