Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 SUB1P1-201ENST00000524415 382 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 AC084851.1-201ENST00000529105 249 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.16□□□□□ -1.9
SIN3AQ96ST3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.16□□□□□ -1.9
SIN3AQ96ST3 MIR5583-1-201ENST00000580941 59 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 AL670379.4-201ENST00000605279 254 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 AC004805.2-201ENST00000605382 482 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 AC104458.1-201ENST00000608243 463 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 AC068831.7-201ENST00000616954 363 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 MIR6076-201ENST00000617521 113 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 AC024940.5-201ENST00000622889 474 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 AC090617.7-201ENST00000623952 126 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 AL512643.1-201ENST00000635735 524 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.16□□□□□ -1.9
SIN3AQ96ST3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.16□□□□□ -1.9
SIN3AQ96ST3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SIN3AQ96ST3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
SIN3AQ96ST3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
SIN3AQ96ST3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
SIN3AQ96ST3 RNU1-91P-201ENST00000364746 163 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 RNU6-1283P-201ENST00000365314 105 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 RN7SKP32-201ENST00000410167 303 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 RNU4-46P-201ENST00000410818 138 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.15□□□□□ -1.91
SIN3AQ96ST3 ZNF863P-201ENST00000426746 417 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 RBMX2P4-201ENST00000441256 376 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 RPL12P25-201ENST00000455592 494 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.15□□□□□ -1.91
SIN3AQ96ST3 MTCO3P38-201ENST00000468910 766 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 HMGN2P13-201ENST00000476476 274 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 AC104435.1-201ENST00000483483 166 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.15□□□□□ -1.91
SIN3AQ96ST3 AC098799.2-201ENST00000509466 868 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.15□□□□□ -1.91
SIN3AQ96ST3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.15□□□□□ -1.91
SIN3AQ96ST3 RNU6-1315P-201ENST00000517187 99 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.15□□□□□ -1.91
SIN3AQ96ST3 AL138976.2-201ENST00000563989 694 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
SIN3AQ96ST3 AP001094.1-201ENST00000579805 193 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.15□□□□□ -1.91
SIN3AQ96ST3 MIR4424-201ENST00000585257 86 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 AP000907.4-201ENST00000604143 237 ntBASIC3.15□□□□□ -1.91
SIN3AQ96ST3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SIN3AQ96ST3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.15□□□□□ -1.91
SIN3AQ96ST3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SIN3AQ96ST3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SIN3AQ96ST3 ZNF271P-202ENST00000465539 1970 ntBASIC3.14□□□□□ -1.91
SIN3AQ96ST3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SIN3AQ96ST3 Y_RNA.295-201ENST00000364918 102 ntBASIC3.14□□□□□ -1.91
SIN3AQ96ST3 RNU6-301P-201ENST00000384277 107 ntBASIC3.14□□□□□ -1.91
SIN3AQ96ST3 AL139095.1-201ENST00000404326 391 ntBASIC3.14□□□□□ -1.91
SIN3AQ96ST3 RNA5SP38-201ENST00000410750 119 ntBASIC3.14□□□□□ -1.91
SIN3AQ96ST3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.14□□□□□ -1.91
SIN3AQ96ST3 HSPE1P1-201ENST00000421494 318 ntBASIC3.14□□□□□ -1.91
SIN3AQ96ST3 MRPS10P2-201ENST00000431226 381 ntBASIC3.14□□□□□ -1.91
SIN3AQ96ST3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.14□□□□□ -1.91
SIN3AQ96ST3 SNRPEP9-201ENST00000436794 238 ntBASIC3.14□□□□□ -1.91
SIN3AQ96ST3 RPL30P14-201ENST00000482744 348 ntBASIC3.14□□□□□ -1.91
SIN3AQ96ST3 EIF4EP3-201ENST00000498782 656 ntBASIC3.14□□□□□ -1.91
SIN3AQ96ST3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SIN3AQ96ST3 RNA5SP165-201ENST00000517142 115 ntBASIC3.14□□□□□ -1.91
SIN3AQ96ST3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.14□□□□□ -1.91
SIN3AQ96ST3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.14□□□□□ -1.91
SIN3AQ96ST3 SNRPGP18-201ENST00000553000 214 ntBASIC3.14□□□□□ -1.91
SIN3AQ96ST3 HMGB1P14-201ENST00000557424 591 ntBASIC3.14□□□□□ -1.91
SIN3AQ96ST3 AC026464.5-201ENST00000562497 722 ntBASIC3.14□□□□□ -1.91
SIN3AQ96ST3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.14□□□□□ -1.91
SIN3AQ96ST3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.14□□□□□ -1.91
SIN3AQ96ST3 FTX_3.1-201ENST00000610451 147 ntBASIC3.14□□□□□ -1.91
SIN3AQ96ST3 RMST_3.1-201ENST00000611651 109 ntBASIC3.14□□□□□ -1.91
SIN3AQ96ST3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SIN3AQ96ST3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SIN3AQ96ST3 RNU4-20P-201ENST00000365601 151 ntBASIC3.13□□□□□ -1.91
SIN3AQ96ST3 RNU1-73P-201ENST00000383971 164 ntBASIC3.13□□□□□ -1.91
SIN3AQ96ST3 SNORA75B-201ENST00000384053 137 ntBASIC3.13□□□□□ -1.91
SIN3AQ96ST3 RNA5SP111-201ENST00000411386 101 ntBASIC3.13□□□□□ -1.91
SIN3AQ96ST3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.13□□□□□ -1.91
SIN3AQ96ST3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.13□□□□□ -1.91
SIN3AQ96ST3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.13□□□□□ -1.91
SIN3AQ96ST3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.13□□□□□ -1.91
SIN3AQ96ST3 MTND1P2-201ENST00000430604 821 ntBASIC3.13□□□□□ -1.91
SIN3AQ96ST3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.13□□□□□ -1.91
SIN3AQ96ST3 RPL36AP53-201ENST00000432891 316 ntBASIC3.13□□□□□ -1.91
SIN3AQ96ST3 CR769767.1-201ENST00000436337 346 ntBASIC3.13□□□□□ -1.91
SIN3AQ96ST3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.13□□□□□ -1.91
SIN3AQ96ST3 AC139453.3-201ENST00000493276 369 ntBASIC3.13□□□□□ -1.91
SIN3AQ96ST3 AC069439.1-201ENST00000494739 167 ntBASIC3.13□□□□□ -1.91
SIN3AQ96ST3 AC087241.2-201ENST00000535801 324 ntBASIC3.13□□□□□ -1.91
SIN3AQ96ST3 LRRC37A5P-203ENST00000580181 585 ntBASIC3.13□□□□□ -1.91
SIN3AQ96ST3 MIR3609-201ENST00000582661 80 ntBASIC3.13□□□□□ -1.91
SIN3AQ96ST3 AL138889.2-201ENST00000603883 242 ntBASIC3.13□□□□□ -1.91
SIN3AQ96ST3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.13□□□□□ -1.91
SIN3AQ96ST3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.13□□□□□ -1.91
SIN3AQ96ST3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SIN3AQ96ST3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SIN3AQ96ST3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.12□□□□□ -1.91
SIN3AQ96ST3 RNU6-371P-201ENST00000364283 108 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 RNU6-1127P-201ENST00000384580 107 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms