Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNU6-5P-201ENST00000384238 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-3P-201ENST00000384314 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-16P-201ENST00000384385 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-15P-201ENST00000384534 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-2-201ENST00000384627 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-29P-201ENST00000384637 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-9-201ENST00000384776 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-33P-201ENST00000384793 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 MIR670-201ENST00000390142 98 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 PTMAP2-201ENST00000397627 327 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 AL030996.1-201ENST00000411430 235 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 SNORD56-201ENST00000413522 71 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 TMEM167AP1-201ENST00000423409 219 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 USP9YP30-201ENST00000430729 455 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RPL12P25-201ENST00000455592 494 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 CEACAMP4-201ENST00000457676 421 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 AC018437.1-201ENST00000492214 406 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU1-61P-201ENST00000516107 151 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-703P-201ENST00000516946 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 AC093331.1-201ENST00000521474 169 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 HMGB1P14-201ENST00000557424 591 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 AC011494.1-201ENST00000596454 237 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 AL355598.1-201ENST00000604169 202 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 RNU6-6P-201ENST00000606623 107 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 AC099778.2-201ENST00000610904 211 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 uc_338.22-201ENST00000622722 187 ntBASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.33□□□□□ -1.88
ATG4AQ8WYN0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 AL133383.2-201ENST00000622958 2336 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 Y_RNA.112-201ENST00000363250 102 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 Y_RNA.202-201ENST00000364083 110 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 Y_RNA.216-201ENST00000364205 93 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 SNORA75.6-201ENST00000391318 127 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 USMG5P1-201ENST00000425964 177 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 AL137792.2-201ENST00000443484 235 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 MTND4P19-201ENST00000446659 478 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 MIR2053-201ENST00000459295 91 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 AL163540.1-201ENST00000485382 386 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 AC113155.1-201ENST00000511141 769 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 SMURF2P1-201ENST00000514992 481 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 AC022634.1-201ENST00000520765 532 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 AC245166.1-201ENST00000521012 253 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 AC008121.1-201ENST00000603244 268 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 AL121917.1-203ENST00000605534 577 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 U2.21-201ENST00000637295 81 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 U6.99-201ENST00000637524 83 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 ZNF807-201ENST00000328088 1707 ntBASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.32□□□□□ -1.88
ATG4AQ8WYN0 FAM35BP-202ENST00000497389 3337 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 RNU6-1115P-201ENST00000362490 106 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 RNU6-1059P-201ENST00000363752 98 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 MIR200C-201ENST00000384980 68 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 RNU6-1106P-201ENST00000390845 107 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 RPL26P27-201ENST00000414397 437 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 RPL32P35-201ENST00000415214 394 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 AC093151.1-201ENST00000427711 313 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 AL133396.1-201ENST00000432048 687 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 HMGN2P31-201ENST00000432430 273 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 AL159987.2-201ENST00000432754 307 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 GOT2P5-201ENST00000433995 546 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 DAP3P1-201ENST00000441522 278 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 AL031274.1-201ENST00000450334 232 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 PCMTD1P1-201ENST00000455560 355 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 AC008155.2-201ENST00000464337 397 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 RPL23AP45-201ENST00000476406 468 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 RNU6-976P-201ENST00000516086 111 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms