Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC064836.2-201ENST00000609491 462 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.82□□□□□ -1.96
SHFQ7M4L6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
SHFQ7M4L6 AL049781.1-201ENST00000623195 3585 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SHFQ7M4L6 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.82□□□□□ -1.96
SHFQ7M4L6 MAPK10-322ENST00000641485 4530 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.81□□□□□ -1.96
SHFQ7M4L6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHFQ7M4L6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHFQ7M4L6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHFQ7M4L6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.81□□□□□ -1.96
SHFQ7M4L6 RNU6-95P-201ENST00000384697 107 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 U3.37-201ENST00000408528 213 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 RNU4-14P-201ENST00000410858 122 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 AC023141.4-201ENST00000412031 328 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 BTF3P15-201ENST00000455606 336 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.81□□□□□ -1.96
SHFQ7M4L6 RNU7-23P-201ENST00000459465 62 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 AC130509.1-201ENST00000464158 433 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.81□□□□□ -1.96
SHFQ7M4L6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
SHFQ7M4L6 RN7SKP282-201ENST00000516824 299 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.81□□□□□ -1.96
SHFQ7M4L6 AL355375.2-201ENST00000574825 175 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 MIR2682-201ENST00000580305 110 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.81□□□□□ -1.96
SHFQ7M4L6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.81□□□□□ -1.96
SHFQ7M4L6 AL161629.2-201ENST00000615347 275 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 ATP5A1P2-202ENST00000616464 443 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 AC010378.1-201ENST00000619270 362 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHFQ7M4L6 CDC27P3-201ENST00000635418 1910 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 AC110774.1-201ENST00000623567 2018 ntBASIC2.81□□□□□ -1.96
SHFQ7M4L6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SHFQ7M4L6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHFQ7M4L6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SHFQ7M4L6 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.81□□□□□ -1.96
SHFQ7M4L6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
SHFQ7M4L6 MTND4P29-201ENST00000503122 1372 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 SNORA14A-201ENST00000364773 135 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 AL356967.1-201ENST00000406305 431 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 RN7SKP158-201ENST00000410453 326 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 AL139396.1-201ENST00000421137 167 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 UBE2V1P4-201ENST00000425374 344 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.8□□□□□ -1.96
SHFQ7M4L6 SNAP23P1-201ENST00000433229 246 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 RPS3AP52-201ENST00000435639 297 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 HIGD1AP11-201ENST00000438361 280 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.8□□□□□ -1.96
SHFQ7M4L6 AC096745.1-201ENST00000509945 370 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.8□□□□□ -1.96
SHFQ7M4L6 RNU6-711P-201ENST00000517255 106 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 AC021739.1-201ENST00000559631 174 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 AC007151.1-201ENST00000572774 483 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.8□□□□□ -1.96
SHFQ7M4L6 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.8□□□□□ -1.96
SHFQ7M4L6 AL121917.1-203ENST00000605534 577 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 AC039056.2-201ENST00000622261 511 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 SCARNA4-202ENST00000625402 129 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 AC012442.3-202ENST00000636742 206 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHFQ7M4L6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHFQ7M4L6 AC233263.6-201ENST00000631132 1963 ntBASIC2.8□□□□□ -1.96
SHFQ7M4L6 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.79□□□□□ -1.96
SHFQ7M4L6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SHFQ7M4L6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHFQ7M4L6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.79□□□□□ -1.96
SHFQ7M4L6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.79□□□□□ -1.96
SHFQ7M4L6 RNU4-79P-201ENST00000362764 141 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 RNU6-78P-201ENST00000362897 107 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 RNU6-942P-201ENST00000363002 107 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 RNU1-100P-201ENST00000365255 165 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 AL445529.1-201ENST00000398713 389 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 RNA5SP274-201ENST00000410484 108 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 AC074085.1-201ENST00000413598 418 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 AL117339.3-201ENST00000418733 162 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 HMGN2P31-201ENST00000432430 273 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 HIGD1AP2-201ENST00000446367 280 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 AC107399.1-201ENST00000451226 265 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 RPL21P10-201ENST00000463521 490 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.79□□□□□ -1.96
SHFQ7M4L6 RPS27P27-201ENST00000498779 255 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 RN7SKP24-201ENST00000515888 284 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 RNA5SP76-201ENST00000516277 87 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 Y_RNA.675-201ENST00000516389 149 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 SNORA31.21-201ENST00000517180 77 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.79□□□□□ -1.96
SHFQ7M4L6 AC007458.1-201ENST00000542812 373 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 AC006199.1-201ENST00000548728 219 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.79□□□□□ -1.96
SHFQ7M4L6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.79□□□□□ -1.96
SHFQ7M4L6 AC010653.1-201ENST00000571108 881 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 AC020895.1-201ENST00000595362 272 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 AC113139.1-201ENST00000605049 239 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 AC016727.1-205ENST00000605437 569 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 AC011890.2-201ENST00000613393 294 ntBASIC2.79□□□□□ -1.96
SHFQ7M4L6 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.79□□□□□ -1.96
SHFQ7M4L6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms