Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RPS20P15-201ENST00000412792 311 ntBASIC2.91□□□□□ -1.94
CDH12P55289 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.91□□□□□ -1.94
CDH12P55289 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH12P55289 AC093151.1-201ENST00000427711 313 ntBASIC2.91□□□□□ -1.94
CDH12P55289 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH12P55289 HMGN2P20-201ENST00000437531 273 ntBASIC2.91□□□□□ -1.94
CDH12P55289 RPL37P4-201ENST00000448908 268 ntBASIC2.91□□□□□ -1.94
CDH12P55289 CYCSP35-201ENST00000451978 304 ntBASIC2.91□□□□□ -1.94
CDH12P55289 RNU7-187P-201ENST00000458985 68 ntBASIC2.91□□□□□ -1.94
CDH12P55289 SNORD19B-201ENST00000459623 84 ntBASIC2.91□□□□□ -1.94
CDH12P55289 AC008155.2-201ENST00000464337 397 ntBASIC2.91□□□□□ -1.94
CDH12P55289 RPL23AP45-201ENST00000476406 468 ntBASIC2.91□□□□□ -1.94
CDH12P55289 RN7SL293P-201ENST00000481765 281 ntBASIC2.91□□□□□ -1.94
CDH12P55289 AP000867.2-201ENST00000532468 320 ntBASIC2.91□□□□□ -1.94
CDH12P55289 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.91□□□□□ -1.94
CDH12P55289 MIR4719-201ENST00000585233 84 ntBASIC2.91□□□□□ -1.94
CDH12P55289 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH12P55289 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDH12P55289 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CDH12P55289 AL136164.4-201ENST00000625013 2135 ntBASIC2.9□□□□□ -1.94
CDH12P55289 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CDH12P55289 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.9□□□□□ -1.94
CDH12P55289 AC110774.1-201ENST00000623567 2018 ntBASIC2.9□□□□□ -1.94
CDH12P55289 MTND5P19-201ENST00000424872 1794 ntBASIC2.9□□□□□ -1.94
CDH12P55289 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
CDH12P55289 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDH12P55289 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CDH12P55289 Y_RNA.394-201ENST00000383942 103 ntBASIC2.9□□□□□ -1.95
CDH12P55289 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CDH12P55289 AL445529.1-201ENST00000398713 389 ntBASIC2.9□□□□□ -1.95
CDH12P55289 RNU6-370P-201ENST00000411008 104 ntBASIC2.9□□□□□ -1.95
CDH12P55289 NDUFS5P4-201ENST00000412983 318 ntBASIC2.9□□□□□ -1.95
CDH12P55289 AF228730.4-201ENST00000421457 183 ntBASIC2.9□□□□□ -1.95
CDH12P55289 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDH12P55289 UBE2V1P4-201ENST00000425374 344 ntBASIC2.9□□□□□ -1.95
CDH12P55289 AC244505.4-201ENST00000434905 287 ntBASIC2.9□□□□□ -1.95
CDH12P55289 HIGD1AP11-201ENST00000438361 280 ntBASIC2.9□□□□□ -1.95
CDH12P55289 AC009969.1-201ENST00000438726 172 ntBASIC2.9□□□□□ -1.95
CDH12P55289 CYCSP32-201ENST00000440548 321 ntBASIC2.9□□□□□ -1.95
CDH12P55289 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CDH12P55289 SSXP5-201ENST00000443473 287 ntBASIC2.9□□□□□ -1.95
CDH12P55289 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH12P55289 RPL26P9-201ENST00000457466 433 ntBASIC2.9□□□□□ -1.95
CDH12P55289 HMGN1P13-201ENST00000505795 138 ntBASIC2.9□□□□□ -1.95
CDH12P55289 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.9□□□□□ -1.95
CDH12P55289 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH12P55289 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.9□□□□□ -1.95
CDH12P55289 APOOP3-201ENST00000536787 586 ntBASIC2.9□□□□□ -1.95
CDH12P55289 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH12P55289 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH12P55289 LINC00933-203ENST00000559812 219 ntBASIC2.9□□□□□ -1.95
CDH12P55289 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH12P55289 MIR4474-201ENST00000579189 78 ntBASIC2.9□□□□□ -1.95
CDH12P55289 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.9□□□□□ -1.95
CDH12P55289 HMGN2P15-201ENST00000585707 270 ntBASIC2.9□□□□□ -1.95
CDH12P55289 AC008121.1-201ENST00000603244 268 ntBASIC2.9□□□□□ -1.95
CDH12P55289 AL121917.1-203ENST00000605534 577 ntBASIC2.9□□□□□ -1.95
CDH12P55289 AL627309.6-201ENST00000606857 840 ntBASIC2.9□□□□□ -1.95
CDH12P55289 MIR6128-201ENST00000615528 109 ntBASIC2.9□□□□□ -1.95
CDH12P55289 ATP5A1P2-202ENST00000616464 443 ntBASIC2.9□□□□□ -1.95
CDH12P55289 AC090574.1-201ENST00000623186 233 ntBASIC2.9□□□□□ -1.95
CDH12P55289 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDH12P55289 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDH12P55289 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.9□□□□□ -1.95
CDH12P55289 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH12P55289 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.9□□□□□ -1.95
CDH12P55289 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDH12P55289 AC008264.2-201ENST00000610193 3731 ntBASIC2.9□□□□□ -1.95
CDH12P55289 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDH12P55289 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CDH12P55289 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CDH12P55289 Y_RNA.259-201ENST00000364619 101 ntBASIC2.89□□□□□ -1.95
CDH12P55289 Y_RNA.460-201ENST00000384255 102 ntBASIC2.89□□□□□ -1.95
CDH12P55289 Y_RNA.482-201ENST00000384377 111 ntBASIC2.89□□□□□ -1.95
CDH12P55289 RNU6-1297P-201ENST00000384415 104 ntBASIC2.89□□□□□ -1.95
CDH12P55289 RNA5SP252-201ENST00000391131 119 ntBASIC2.89□□□□□ -1.95
CDH12P55289 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.89□□□□□ -1.95
CDH12P55289 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH12P55289 BPY2DP-201ENST00000422208 265 ntBASIC2.89□□□□□ -1.95
CDH12P55289 AL645568.3-201ENST00000433683 316 ntBASIC2.89□□□□□ -1.95
CDH12P55289 AL714022.1-201ENST00000439897 151 ntBASIC2.89□□□□□ -1.95
CDH12P55289 AL031274.1-201ENST00000450334 232 ntBASIC2.89□□□□□ -1.95
CDH12P55289 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.89□□□□□ -1.95
CDH12P55289 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.89□□□□□ -1.95
CDH12P55289 RNU6-1153P-201ENST00000516760 105 ntBASIC2.89□□□□□ -1.95
CDH12P55289 Y_RNA.718-201ENST00000517110 102 ntBASIC2.89□□□□□ -1.95
CDH12P55289 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH12P55289 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.89□□□□□ -1.95
CDH12P55289 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.89□□□□□ -1.95
CDH12P55289 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH12P55289 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.89□□□□□ -1.95
CDH12P55289 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH12P55289 AC044792.1-201ENST00000593294 196 ntBASIC2.89□□□□□ -1.95
CDH12P55289 AL133255.1-201ENST00000606374 441 ntBASIC2.89□□□□□ -1.95
CDH12P55289 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CDH12P55289 AL161629.2-201ENST00000615347 275 ntBASIC2.89□□□□□ -1.95
CDH12P55289 AL138880.2-201ENST00000616214 239 ntBASIC2.89□□□□□ -1.95
CDH12P55289 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.89□□□□□ -1.95
CDH12P55289 AC010378.1-201ENST00000619270 362 ntBASIC2.89□□□□□ -1.95
CDH12P55289 AL160413.1-201ENST00000622780 310 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms