Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RNA5SP112-201ENST00000515937 99 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.69□□□□□ -1.98
HNF4AP41235 OR5AL2P-201ENST00000532185 920 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 AC093732.2-201ENST00000607950 274 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 AC011155.2-201ENST00000623202 216 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 Z99571.1-201ENST00000636677 394 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 AC024614.3-201ENST00000637860 256 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.69□□□□□ -1.98
HNF4AP41235 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.69□□□□□ -1.98
HNF4AP41235 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HNF4AP41235 CKAP2P1-201ENST00000555477 2049 ntBASIC2.69□□□□□ -1.98
HNF4AP41235 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HNF4AP41235 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HNF4AP41235 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HNF4AP41235 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HNF4AP41235 MTND5P17-201ENST00000418405 1603 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HNF4AP41235 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HNF4AP41235 RNY3P3-201ENST00000363816 102 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 Y_RNA.255-201ENST00000364581 97 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 RNU6-996P-201ENST00000365438 107 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 RNU6-877P-201ENST00000383868 107 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 RNU6-748P-201ENST00000384648 107 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 Y_RNA.573-201ENST00000384763 105 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 UBE2V1P2-201ENST00000397758 440 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 Y_RNA.604-201ENST00000410574 102 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 RPL30P16-201ENST00000419341 429 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.68□□□□□ -1.98
HNF4AP41235 RPL30P4-201ENST00000429309 333 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 AL591212.2-201ENST00000433923 257 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 AC025750.2-201ENST00000442609 450 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 AL135938.1-201ENST00000443141 297 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 AC073415.1-201ENST00000449240 153 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 AL118520.1-201ENST00000450770 291 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 AC092001.1-201ENST00000453012 261 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.68□□□□□ -1.98
HNF4AP41235 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.68□□□□□ -1.98
HNF4AP41235 AL162395.1-201ENST00000457882 422 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 RNU7-182P-201ENST00000459009 62 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 RPL31P58-201ENST00000469001 379 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 RN7SL297P-201ENST00000483161 293 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 AL163973.1-201ENST00000484753 577 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 AC105417.1-201ENST00000514691 285 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 RN7SKP219-201ENST00000516825 296 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.68□□□□□ -1.98
HNF4AP41235 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.68□□□□□ -1.98
HNF4AP41235 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.68□□□□□ -1.98
HNF4AP41235 AP005435.4-201ENST00000529514 284 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 HIF1AP1-201ENST00000553642 175 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.68□□□□□ -1.98
HNF4AP41235 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.68□□□□□ -1.98
HNF4AP41235 AC106782.4-201ENST00000568264 210 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HNF4AP41235 AC105245.1-201ENST00000581934 244 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 BNIP3P30-201ENST00000601184 574 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 AC135507.2-201ENST00000612443 309 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 AC024940.5-201ENST00000622889 474 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 AC025034.2-201ENST00000623264 286 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.68□□□□□ -1.98
HNF4AP41235 AL109809.4-201ENST00000603520 2185 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HNF4AP41235 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HNF4AP41235 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.68□□□□□ -1.98
HNF4AP41235 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.68□□□□□ -1.98
HNF4AP41235 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.67□□□□□ -1.98
HNF4AP41235 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.67□□□□□ -1.98
HNF4AP41235 RNU6-451P-201ENST00000362921 107 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 RNU6-179P-201ENST00000363350 107 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 SNORA67.1-201ENST00000364749 141 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 SNORD115-7-201ENST00000365306 82 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 RNU6-1029P-201ENST00000384109 107 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 RNU1-52P-201ENST00000384190 164 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 Y_RNA.576-201ENST00000384781 102 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 U6atac.2-201ENST00000408644 118 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 AC096664.2-201ENST00000411843 406 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 AL109913.1-201ENST00000421173 514 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 COTL1P1-201ENST00000422309 375 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 Z98742.2-201ENST00000431564 187 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 AC236972.1-201ENST00000433225 199 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 AP001324.2-201ENST00000461163 319 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 GMFBP1-201ENST00000467831 427 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 RPL22P13-201ENST00000493291 347 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 RBBP4P6-201ENST00000508098 202 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.67□□□□□ -1.98
HNF4AP41235 AC108078.2-201ENST00000510750 236 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 AC074344.1-201ENST00000512823 224 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 RNU6-358P-201ENST00000516564 75 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.67□□□□□ -1.98
HNF4AP41235 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.67□□□□□ -1.98
HNF4AP41235 AC004486.1-201ENST00000546846 233 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.67□□□□□ -1.98
HNF4AP41235 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.67□□□□□ -1.98
HNF4AP41235 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.67□□□□□ -1.98
HNF4AP41235 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.67□□□□□ -1.98
HNF4AP41235 MIR4446-201ENST00000578505 67 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 AC174048.1-201ENST00000603389 144 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 AC007938.3-201ENST00000604965 623 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 AC008945.2-201ENST00000606056 604 ntBASIC2.67□□□□□ -1.98
HNF4AP41235 AC005046.1-201ENST00000608515 625 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms