Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MIR2116-201ENST00000517221 80 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.83□□□□□ -1.8
COL6A2P12110 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.83□□□□□ -1.8
COL6A2P12110 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.83□□□□□ -1.8
COL6A2P12110 AC006600.1-201ENST00000572529 153 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 MIR3668-201ENST00000582138 75 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 AC024153.1-201ENST00000603103 365 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 AL445567.2-201ENST00000618935 498 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 AC090617.7-201ENST00000623952 126 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 AC068724.3-201ENST00000625906 87 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.83□□□□□ -1.8
COL6A2P12110 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL6A2P12110 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
COL6A2P12110 AC032011.1-201ENST00000611703 1549 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COL6A2P12110 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.83□□□□□ -1.8
COL6A2P12110 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL6A2P12110 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
COL6A2P12110 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
COL6A2P12110 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.82□□□□□ -1.8
COL6A2P12110 MTND5P7-201ENST00000413558 1798 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.82□□□□□ -1.8
COL6A2P12110 AC007656.2-201ENST00000624902 4547 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
COL6A2P12110 DEFB109C-201ENST00000382575 264 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 DEFB109B-201ENST00000382656 264 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 MIR518D-201ENST00000385014 87 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 RPL21P1-201ENST00000399532 476 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 RPL26P27-201ENST00000414397 437 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 MTND3P9-201ENST00000429526 346 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 MTCO3P8-201ENST00000453691 755 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 AC006026.2-201ENST00000457376 180 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 RN7SKP210-201ENST00000459176 261 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
COL6A2P12110 SNORA31.9-201ENST00000516429 84 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 RNU1-103P-201ENST00000516502 125 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.82□□□□□ -1.8
COL6A2P12110 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL6A2P12110 AC010186.2-204ENST00000537668 439 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.82□□□□□ -1.8
COL6A2P12110 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.82□□□□□ -1.8
COL6A2P12110 AC006077.1-201ENST00000604746 343 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.82□□□□□ -1.8
COL6A2P12110 MIR1244-1-201ENST00000612829 85 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.82□□□□□ -1.8
COL6A2P12110 MIR1244-3-201ENST00000635744 85 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 MIR1244-2-201ENST00000636449 85 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 MIR1244-4-202ENST00000636813 85 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 CEP170P1-201ENST00000502249 4587 ntBASIC3.82□□□□□ -1.8
COL6A2P12110 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
COL6A2P12110 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL6A2P12110 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL6A2P12110 RNY3P11-201ENST00000364153 102 ntBASIC3.81□□□□□ -1.8
COL6A2P12110 Y_RNA.210-201ENST00000364161 110 ntBASIC3.81□□□□□ -1.8
COL6A2P12110 SNORA69.1-201ENST00000390904 137 ntBASIC3.81□□□□□ -1.8
COL6A2P12110 MIR888-201ENST00000401186 77 ntBASIC3.81□□□□□ -1.8
COL6A2P12110 AP000275.1-201ENST00000411943 390 ntBASIC3.81□□□□□ -1.8
COL6A2P12110 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.81□□□□□ -1.8
COL6A2P12110 FCF1P4-201ENST00000448326 183 ntBASIC3.81□□□□□ -1.8
COL6A2P12110 RPS3AP46-201ENST00000448352 682 ntBASIC3.81□□□□□ -1.8
COL6A2P12110 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.81□□□□□ -1.8
COL6A2P12110 RN7SL283P-201ENST00000489055 303 ntBASIC3.81□□□□□ -1.8
COL6A2P12110 RN7SKP83-201ENST00000516512 178 ntBASIC3.81□□□□□ -1.8
COL6A2P12110 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.81□□□□□ -1.8
COL6A2P12110 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.81□□□□□ -1.8
COL6A2P12110 AC012468.1-201ENST00000604888 430 ntBASIC3.81□□□□□ -1.8
COL6A2P12110 U2.1-201ENST00000618978 145 ntBASIC3.81□□□□□ -1.8
COL6A2P12110 MIR8062-201ENST00000621515 85 ntBASIC3.81□□□□□ -1.8
COL6A2P12110 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL6A2P12110 SRP72P2-201ENST00000344851 1979 ntBASIC3.81□□□□□ -1.8
COL6A2P12110 ZNF72P-201ENST00000425869 1908 ntBASIC3.81□□□□□ -1.8
COL6A2P12110 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL6A2P12110 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.81□□□□□ -1.8
COL6A2P12110 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.81□□□□□ -1.8
COL6A2P12110 AF117829.1-206ENST00000621883 3802 ntBASIC3.81□□□□□ -1.8
COL6A2P12110 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
COL6A2P12110 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL6A2P12110 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.8□□□□□ -1.8
COL6A2P12110 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL6A2P12110 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL6A2P12110 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL6A2P12110 RNU6-105P-201ENST00000363909 104 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 RNU4-50P-201ENST00000364361 141 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 RNU6-1318P-201ENST00000365389 103 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 RNU1-73P-201ENST00000383971 164 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 U1.1-201ENST00000384101 164 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 RNU6-1222P-201ENST00000384615 107 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 RPL21P17-201ENST00000397467 475 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 AP000567.1-201ENST00000406413 156 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 RNA5SP494-201ENST00000410653 129 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 AL691449.1-201ENST00000426570 421 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.8□□□□□ -1.8
COL6A2P12110 SETP5-201ENST00000437270 562 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 RPL21P2-201ENST00000440049 481 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.8□□□□□ -1.8
COL6A2P12110 AC098831.1-201ENST00000440661 216 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 RPS3AP12-201ENST00000443616 753 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms