Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 RNU6-758P-201ENST00000516292 89 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 CYB5AP5-201ENST00000549779 389 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 NACAP3-201ENST00000552100 481 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.27□□□□□ -2.37
POLR1AO95602 AC012414.6-201ENST00000568241 401 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 ZNF663P-202ENST00000641770 1131 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 RNU1-58P-201ENST00000362413 163 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 RNU6-251P-201ENST00000363235 104 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 RNA5SP368-201ENST00000364298 116 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 RNU2-49P-201ENST00000410666 184 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.27□□□□□ -2.37
POLR1AO95602 AL512637.2-201ENST00000431287 1256 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 AL512844.2-201ENST00000433990 593 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 AC132479.1-201ENST00000449160 144 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 VPS26AP1-201ENST00000483197 979 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
POLR1AO95602 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
POLR1AO95602 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.27□□□□□ -2.37
POLR1AO95602 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.27□□□□□ -2.37
POLR1AO95602 RNU6-414P-201ENST00000363705 104 ntBASIC0.26□□□□□ -2.37
POLR1AO95602 SNORA25B-201ENST00000365507 128 ntBASIC0.26□□□□□ -2.37
POLR1AO95602 MTND2P9-201ENST00000422293 931 ntBASIC0.26□□□□□ -2.37
POLR1AO95602 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.26□□□□□ -2.37
POLR1AO95602 RPL21P47-201ENST00000483696 477 ntBASIC0.26□□□□□ -2.37
POLR1AO95602 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.26□□□□□ -2.37
POLR1AO95602 RNU4-54P-201ENST00000516428 129 ntBASIC0.26□□□□□ -2.37
POLR1AO95602 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.26□□□□□ -2.37
POLR1AO95602 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
POLR1AO95602 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.26□□□□□ -2.37
POLR1AO95602 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.26□□□□□ -2.37
POLR1AO95602 RNU6-486P-201ENST00000363116 107 ntBASIC0.25□□□□□ -2.37
POLR1AO95602 SNORA4.1-201ENST00000364263 144 ntBASIC0.25□□□□□ -2.37
POLR1AO95602 SNORA4.3-201ENST00000365564 137 ntBASIC0.25□□□□□ -2.37
POLR1AO95602 HMGB1P17-201ENST00000403495 628 ntBASIC0.25□□□□□ -2.37
POLR1AO95602 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.25□□□□□ -2.37
POLR1AO95602 BEND7P1-201ENST00000422058 457 ntBASIC0.25□□□□□ -2.37
POLR1AO95602 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.25□□□□□ -2.37
POLR1AO95602 AC245102.2-201ENST00000448956 180 ntBASIC0.25□□□□□ -2.37
POLR1AO95602 AC010631.1-201ENST00000474150 156 ntBASIC0.25□□□□□ -2.37
POLR1AO95602 C1DP5-201ENST00000525775 383 ntBASIC0.25□□□□□ -2.37
POLR1AO95602 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.25□□□□□ -2.37
POLR1AO95602 SNORA77B-201ENST00000578179 125 ntBASIC0.25□□□□□ -2.37
POLR1AO95602 MIR4305-201ENST00000583252 102 ntBASIC0.25□□□□□ -2.37
POLR1AO95602 BNIP3P23-201ENST00000599655 511 ntBASIC0.25□□□□□ -2.37
POLR1AO95602 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.24□□□□□ -2.37
POLR1AO95602 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.24□□□□□ -2.37
POLR1AO95602 AC027119.1-201ENST00000440877 241 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.24□□□□□ -2.37
POLR1AO95602 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.24□□□□□ -2.37
POLR1AO95602 AC067940.1-201ENST00000458411 300 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.24□□□□□ -2.37
POLR1AO95602 AC018659.1-201ENST00000551083 169 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 MIR3937-201ENST00000580135 106 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 AC005261.5-201ENST00000596280 355 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 MZT1P2-201ENST00000604387 248 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 AL357075.2-201ENST00000614906 189 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 AC092125.1-201ENST00000562568 1995 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 SNORD18A-201ENST00000363753 72 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 RNU6-348P-201ENST00000384386 107 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 RNA5SP100-201ENST00000410903 110 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 RNA5SP59-201ENST00000410922 110 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 MTCO1P44-201ENST00000441935 243 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 AC104073.1-201ENST00000451988 151 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 MIR4667-201ENST00000578933 66 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 AC096720.1-201ENST00000604441 183 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.24□□□□□ -2.37
POLR1AO95602 BX284668.6-201ENST00000606899 438 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.24□□□□□ -2.37
POLR1AO95602 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.23□□□□□ -2.37
POLR1AO95602 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
POLR1AO95602 RNU6-700P-201ENST00000391043 107 ntBASIC0.23□□□□□ -2.37
POLR1AO95602 AL355615.1-201ENST00000406187 641 ntBASIC0.23□□□□□ -2.37
POLR1AO95602 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.23□□□□□ -2.37
POLR1AO95602 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.23□□□□□ -2.37
POLR1AO95602 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.23□□□□□ -2.37
POLR1AO95602 AL358794.1-201ENST00000445689 381 ntBASIC0.23□□□□□ -2.37
POLR1AO95602 MTND1P16-201ENST00000465177 898 ntBASIC0.23□□□□□ -2.37
POLR1AO95602 COX6CP6-201ENST00000490840 228 ntBASIC0.23□□□□□ -2.37
POLR1AO95602 RNU6-488P-201ENST00000515918 99 ntBASIC0.23□□□□□ -2.37
POLR1AO95602 SNORA31.17-201ENST00000516953 127 ntBASIC0.23□□□□□ -2.37
POLR1AO95602 AC124947.2-202ENST00000552735 133 ntBASIC0.23□□□□□ -2.37
POLR1AO95602 CYP3A52P-201ENST00000563326 91 ntBASIC0.23□□□□□ -2.37
POLR1AO95602 FAM60CP-201ENST00000591086 664 ntBASIC0.23□□□□□ -2.37
POLR1AO95602 AC112220.3-201ENST00000605502 502 ntBASIC0.23□□□□□ -2.37
POLR1AO95602 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.23□□□□□ -2.37
POLR1AO95602 AC009033.1-201ENST00000624279 431 ntBASIC0.23□□□□□ -2.37
POLR1AO95602 RNU2-47P-201ENST00000410649 186 ntBASIC0.22□□□□□ -2.37
POLR1AO95602 RSL24D1P8-201ENST00000434442 492 ntBASIC0.22□□□□□ -2.37
POLR1AO95602 RPL36AP48-201ENST00000485521 314 ntBASIC0.22□□□□□ -2.37
POLR1AO95602 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.22□□□□□ -2.37
POLR1AO95602 NRON-201ENST00000517270 370 ntBASIC0.22□□□□□ -2.37
POLR1AO95602 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.22□□□□□ -2.37
POLR1AO95602 AC136619.2-201ENST00000563361 631 ntBASIC0.22□□□□□ -2.37
POLR1AO95602 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.22□□□□□ -2.37
POLR1AO95602 SNORD115-3-201ENST00000363100 82 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 RNU6-45P-201ENST00000384471 107 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 RNU6-441P-201ENST00000384545 106 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms