Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MTND5P7-201ENST00000413558 1798 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDKL5O76039 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDKL5O76039 SNORD62.1-201ENST00000362541 86 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 Y_RNA.158-201ENST00000363651 101 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 RNU6-1059P-201ENST00000363752 98 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 Y_RNA.252-201ENST00000364556 101 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 SNORA7.4-201ENST00000384249 137 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 RNU6-196P-201ENST00000384315 107 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 Y_RNA.496-201ENST00000384444 101 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 MIR568-201ENST00000385036 95 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 MIR548F4-201ENST00000408515 105 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 MTCO1P39-201ENST00000426148 480 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.64□□□□□ -1.83
CDKL5O76039 USP9YP30-201ENST00000430729 455 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.64□□□□□ -1.83
CDKL5O76039 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.64□□□□□ -1.83
CDKL5O76039 RPS12P18-201ENST00000442381 270 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.64□□□□□ -1.83
CDKL5O76039 AL358232.1-201ENST00000448030 501 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 RPL37P6-201ENST00000460682 294 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 HSPE1P6-201ENST00000479457 291 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 SUMO2P6-201ENST00000505273 288 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 Y_RNA.661-201ENST00000516003 99 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 RNA5SP384-201ENST00000516615 116 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 AC245166.1-201ENST00000521012 253 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 AP003122.3-201ENST00000526316 255 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDKL5O76039 MIR5680-201ENST00000577577 84 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.64□□□□□ -1.83
CDKL5O76039 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.64□□□□□ -1.83
CDKL5O76039 ELOCP5-201ENST00000604924 333 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
CDKL5O76039 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.64□□□□□ -1.83
CDKL5O76039 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDKL5O76039 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDKL5O76039 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDKL5O76039 RNU6-214P-201ENST00000384130 107 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 RNY1P14-201ENST00000384426 108 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 SNORD15B-201ENST00000384714 146 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 RNU6-331P-201ENST00000384724 107 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.63□□□□□ -1.83
CDKL5O76039 SNRPEP4-201ENST00000435815 279 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.63□□□□□ -1.83
CDKL5O76039 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.63□□□□□ -1.83
CDKL5O76039 RPL12P25-201ENST00000455592 494 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 SNORD5.1-201ENST00000458800 75 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 RNU7-187P-201ENST00000458985 68 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 RNU7-138P-201ENST00000459479 64 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 MTATP8P1-201ENST00000467115 207 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 VN1R104P-201ENST00000505115 1009 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 RNA5SP385-201ENST00000515947 110 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 SCARNA16.2-201ENST00000516520 172 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 RNA5SP471-201ENST00000516971 106 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDKL5O76039 COX6CP5-201ENST00000527162 228 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.63□□□□□ -1.83
CDKL5O76039 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.63□□□□□ -1.83
CDKL5O76039 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.63□□□□□ -1.83
CDKL5O76039 AC011494.1-201ENST00000596454 237 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 AC006157.1-201ENST00000611750 366 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 AC034102.8-201ENST00000615146 484 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CDKL5O76039 AC099506.2-201ENST00000623074 221 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.63□□□□□ -1.83
CDKL5O76039 MIR622-201ENST00000638396 96 ntBASIC3.63□□□□□ -1.83
CDKL5O76039 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDKL5O76039 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CDKL5O76039 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDKL5O76039 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.63□□□□□ -1.83
CDKL5O76039 Y_RNA.364-201ENST00000365532 101 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 Y_RNA.480-201ENST00000384364 102 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 Y_RNA.527-201ENST00000384573 102 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 MIR607-201ENST00000385241 96 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 RNA5SP120-201ENST00000410900 112 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.62□□□□□ -1.83
CDKL5O76039 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.62□□□□□ -1.83
CDKL5O76039 HMGB1P9-201ENST00000429856 646 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 AL592045.1-201ENST00000429867 352 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.62□□□□□ -1.83
CDKL5O76039 GSTA11P-201ENST00000452866 669 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.62□□□□□ -1.83
CDKL5O76039 AL049874.1-201ENST00000489560 388 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.62□□□□□ -1.83
CDKL5O76039 SNORA25.10-201ENST00000515926 124 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 RNU6-470P-201ENST00000515954 104 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 RNU6-927P-201ENST00000516199 100 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 RNU6-699P-201ENST00000517081 110 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 SNORA31.20-201ENST00000517111 133 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 AC104576.1-201ENST00000524225 88 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 AC010653.1-201ENST00000571108 881 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 FAM60BP-201ENST00000578364 658 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 MIR5692A1-201ENST00000580523 69 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 MIR4503-201ENST00000582187 83 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 MIR4506-201ENST00000584693 77 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 MIR548AC-201ENST00000585049 88 ntBASIC3.62□□□□□ -1.83
CDKL5O76039 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.62□□□□□ -1.83
CDKL5O76039 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDKL5O76039 MIR7112-201ENST00000616126 65 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms