Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 RNA5SP50-201ENST00000363731 107 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 RNU4-76P-201ENST00000364509 141 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 RNA5SP267-201ENST00000364893 126 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 RNU1-140P-201ENST00000365040 165 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 RNU6-310P-201ENST00000384655 107 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 MIR147B-201ENST00000390185 80 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 Y_RNA.579-201ENST00000390939 94 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 AC096649.2-201ENST00000416186 393 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 AF228730.4-201ENST00000421457 183 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 AL365496.1-201ENST00000426885 215 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 AL441985.1-201ENST00000457727 251 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 AC069499.1-201ENST00000489433 509 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 RPS27P26-201ENST00000494583 239 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 AC026784.1-201ENST00000507986 352 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 MIR4719-201ENST00000585233 84 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 BNIP3P16-201ENST00000589779 534 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 AC011494.1-201ENST00000596454 237 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 AC091152.3-201ENST00000604227 325 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 AC005000.2-201ENST00000605468 310 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 AP003355.3-201ENST00000623465 114 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 MIR3529-201ENST00000637713 78 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 CD24P4-201ENST00000382840 243 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 MIR634-201ENST00000385208 97 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 Y_RNA.646-201ENST00000410980 101 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 AC074117.2-201ENST00000417130 397 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 USMG5P1-201ENST00000425964 177 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 SAR1AP4-201ENST00000429225 591 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 NDUFB1P1-201ENST00000435191 180 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 MTCO3P10-201ENST00000455912 772 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 BX510359.1-201ENST00000456973 237 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 SNORA70.18-201ENST00000516696 98 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 RNU6-1153P-201ENST00000516760 105 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 RNU6-579P-201ENST00000516879 102 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 AC007458.1-201ENST00000542812 373 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 CPDP1-201ENST00000579660 283 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 AC044792.1-201ENST00000593294 196 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 VN1R107P-201ENST00000601784 209 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 AL356055.1-201ENST00000602528 446 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 AC024581.2-201ENST00000619986 252 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 MIR3651-201ENST00000630427 90 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 AC241585.2-209ENST00000638217 143 ntBASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
MBD3L4A6NDZ8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 RBBP8P1-201ENST00000449447 1844 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 Y_RNA.111-201ENST00000363248 100 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 Y_RNA.146-201ENST00000363549 102 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 RNU6-799P-201ENST00000363567 107 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 RNA5SP139-201ENST00000364340 117 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 U8.8-201ENST00000365399 135 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 Y_RNA.394-201ENST00000383942 103 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 Y_RNA.404-201ENST00000383978 102 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 RNU6-842P-201ENST00000384269 107 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 RNU6-692P-201ENST00000384496 107 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 MIR490-201ENST00000384865 128 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 AC007677.1-201ENST00000445757 515 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 RNU7-170P-201ENST00000459303 61 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 SNORA59A-201ENST00000459326 152 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 GZMAP1-201ENST00000503054 631 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 AC093303.1-201ENST00000514549 295 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 RNU6-1170P-201ENST00000515974 106 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 Y_RNA.701-201ENST00000516812 110 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 MIR8076-201ENST00000611401 83 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms