Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC068587.5-201ENST00000528506 175 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 MIR4528-201ENST00000577763 90 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 MIR4782-201ENST00000577987 79 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 MIR4446-201ENST00000578505 67 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 SNRPGP19-201ENST00000603826 189 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC087752.4-201ENST00000605911 462 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AL139286.2-201ENST00000606838 396 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AL359547.2-201ENST00000615810 418 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC009509.4-201ENST00000619202 509 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AL359757.2-201ENST00000624309 274 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC080128.1-201ENST00000474389 1917 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AL390237.1-201ENST00000404226 1415 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-179P-201ENST00000363350 107 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 RNA5SP160-201ENST00000364866 120 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 Y_RNA.359-201ENST00000365498 102 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-395P-201ENST00000365662 106 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 SNORD116-1-201ENST00000384335 95 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 Y_RNA.576-201ENST00000384781 102 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 MIR764-201ENST00000390811 85 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC019129.1-201ENST00000403786 261 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC016831.2-201ENST00000417179 352 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AL591806.2-201ENST00000433122 173 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 MTND4P32-201ENST00000437189 1237 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 OSTCP8-201ENST00000445117 448 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AL360271.2-201ENST00000447710 161 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AL162395.1-201ENST00000457882 422 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC023194.1-201ENST00000493084 308 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC026801.1-201ENST00000497178 464 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 SNORD19.2-201ENST00000516978 73 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-685P-201ENST00000517088 95 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 ADI1P3-201ENST00000549509 470 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC098848.2-201ENST00000588023 330 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC245014.2-201ENST00000603689 287 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC246785.4-201ENST00000605374 287 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AL121917.1-203ENST00000605534 577 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC136475.10-201ENST00000620253 385 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 AC138649.3-201ENST00000622154 254 ntBASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SMIM28A0A1B0GU29 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 SNORA62.1-201ENST00000364287 154 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 SNORD14B-201ENST00000364533 90 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 SNORD115-7-201ENST00000365306 82 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-108P-201ENST00000365558 107 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 SNORD116-2-201ENST00000384274 95 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 SNORD116-6-201ENST00000384711 96 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 MTCO2P34-201ENST00000421994 607 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 AC133104.1-201ENST00000429100 218 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 MTCO3P5-201ENST00000433620 714 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 AC009961.3-201ENST00000449832 765 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 AL021397.1-201ENST00000451806 248 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 snoU13.23-201ENST00000458863 104 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 RNU7-26P-201ENST00000458980 63 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 AP001324.2-201ENST00000461163 319 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 MTAPP1-201ENST00000489154 819 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 AC090096.1-201ENST00000489168 390 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 OR5AL2P-201ENST00000532185 920 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 AC135279.1-201ENST00000543493 504 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 AC006362.1-201ENST00000567392 174 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 AC007151.1-201ENST00000572774 483 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 AC009314.1-201ENST00000603871 304 ntBASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 AC090582.1-201ENST00000636321 199 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms