Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC007991.1-201ENST00000522680 631 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 AL133393.1-201ENST00000603277 287 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 AL360085.1-201ENST00000604713 532 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 AC064801.1-201ENST00000612025 407 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 AC083806.3-201ENST00000614016 455 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 AC241585.2-209ENST00000638217 143 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 LINC02471-203ENST00000641941 4752 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 RNU6-1115P-201ENST00000362490 106 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 RNU6-227P-201ENST00000362865 103 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 Y_RNA.111-201ENST00000363248 100 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 RNU1-140P-201ENST00000365040 165 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 SNORA33.2-201ENST00000365413 134 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 Y_RNA.428-201ENST00000384078 102 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 RNU6-692P-201ENST00000384496 107 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 SNORA41-201ENST00000384675 132 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 RNVU1-14-201ENST00000384770 164 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 SAR1AP2-201ENST00000392696 594 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 Z92545.1-201ENST00000411782 234 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 ATP5A1P2-201ENST00000412323 255 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 RPS3AP46-201ENST00000448352 682 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 CYCSP35-201ENST00000451978 304 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 RPS26P28-201ENST00000470806 348 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 RNU6-327P-201ENST00000516270 127 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 RNU1-30P-201ENST00000606575 163 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 SNORA50A-202ENST00000629536 136 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 ZNF962P-201ENST00000443465 3140 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 MTND4P1-201ENST00000457501 1466 ntBASIC3.86□□□□□ -1.79
CCDC163A0A0D9SF12 CDC27P3-201ENST00000635418 1910 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 AC004944.1-201ENST00000517807 3059 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 Y_RNA.28-201ENST00000362554 111 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 RNU6-99P-201ENST00000364721 107 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 RNA5SP267-201ENST00000364893 126 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 RNU6-596P-201ENST00000365395 98 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 RNU6-1027P-201ENST00000383998 107 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 RPS29P13-201ENST00000402041 169 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 AC023141.4-201ENST00000412031 328 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 AC004552.1-201ENST00000419089 348 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 AC243428.1-201ENST00000421099 264 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 NUP35P1-201ENST00000422734 947 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 AL161651.1-201ENST00000440882 223 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 AC011816.1-201ENST00000441346 546 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 MTND4P19-201ENST00000446659 478 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 RPS26P3-201ENST00000470205 348 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 AP002884.2-201ENST00000471647 395 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 AC090543.2-201ENST00000483963 348 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 AC004057.1-201ENST00000485827 348 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 AC022447.4-201ENST00000504053 364 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 SNORD116.3-201ENST00000517176 78 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 DNAJC8P1-201ENST00000554535 372 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 AC005034.5-201ENST00000604219 466 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 AC007485.1-201ENST00000616755 206 ntBASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
CCDC163A0A0D9SF12 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 MTND5P9-201ENST00000503854 1755 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 AC009541.1-201ENST00000438279 2662 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 RNY1P16-201ENST00000363063 111 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 Y_RNA.112-201ENST00000363250 102 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 Y_RNA.314-201ENST00000365114 102 ntBASIC3.84□□□□□ -1.79
CCDC163A0A0D9SF12 CD24P4-201ENST00000382840 243 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms