Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 EIF4EP2-201ENST00000422816 654 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC137499.1-201ENST00000427602 88 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 MTND1P20-201ENST00000430341 950 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 AL591212.2-201ENST00000433923 257 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 Z73417.1-201ENST00000447373 778 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC245102.2-201ENST00000448956 180 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC027575.1-201ENST00000481064 460 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC112204.1-201ENST00000502591 103 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 RNU6-667P-201ENST00000517186 102 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 RNU6-586P-201ENST00000517265 104 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 RPL30P11-203ENST00000598995 310 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 AL359999.1-201ENST00000604513 294 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC013244.3-201ENST00000605614 388 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC126118.1-201ENST00000607744 628 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 TUSC7.1-201ENST00000610969 165 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC016597.2-201ENST00000613256 341 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 AL139418.1-201ENST00000613613 177 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 MIR219B-201ENST00000637023 88 ntBASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
COMMD3-BMI1R4GMX3 SNORD114-19-201ENST00000363072 75 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 SNORA16.1-201ENST00000364597 132 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 RNU6-395P-201ENST00000365662 106 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 RNU1-57P-201ENST00000384491 166 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 RPS20P2-201ENST00000402520 389 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 FCF1P10-201ENST00000407590 479 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 SNORA3.2-201ENST00000408221 125 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 RNU2-2P-201ENST00000410396 191 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 RN7SKP223-201ENST00000410582 62 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 Z98742.3-201ENST00000418637 326 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 DPH3P2-201ENST00000422618 250 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 AL354941.1-201ENST00000438600 464 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 AL606662.1-201ENST00000445763 553 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 RNA5SP57-201ENST00000459463 123 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 MTCO2P29-201ENST00000465212 189 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 RPL7P43-201ENST00000478876 753 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC091951.3-201ENST00000504093 246 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC109927.2-201ENST00000506416 303 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC022254.1-201ENST00000567857 235 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC104984.5-201ENST00000586878 94 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 U2.15-201ENST00000611544 191 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 U2.16-201ENST00000613119 191 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 U2.12-201ENST00000613778 191 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 U2.20-201ENST00000613956 192 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 U2.9-201ENST00000615427 191 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 U2.11-201ENST00000616345 191 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 U2.2-201ENST00000616535 191 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 U2.3-201ENST00000617785 191 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 U2.19-201ENST00000618602 191 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 RNU2-1-201ENST00000618664 191 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 U2.6-201ENST00000619225 191 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 U2.5-201ENST00000619465 191 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 AL607023.1-201ENST00000620045 248 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 U2.10-201ENST00000620268 191 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 AL078595.3-201ENST00000623815 1166 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 MTND4P16-201ENST00000466108 1367 ntBASIC1.72□□□□□ -2.13
COMMD3-BMI1R4GMX3 HAUS6P2-201ENST00000433254 2404 ntBASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 SNORD115-3-201ENST00000363100 82 ntBASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 SMIM11P1-201ENST00000369586 178 ntBASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 RNU6-1200P-201ENST00000384162 107 ntBASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 MIR518D-201ENST00000385014 87 ntBASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 MIR934-201ENST00000401241 83 ntBASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 MIR1261-201ENST00000408659 82 ntBASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 RNU6-1025P-201ENST00000410629 104 ntBASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 OR9R1P-201ENST00000412200 877 ntBASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 RPL22P18-201ENST00000417197 377 ntBASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 AL445646.1-201ENST00000431784 216 ntBASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 FAM92A1P2-202ENST00000504766 877 ntBASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.71□□□□□ -2.14
COMMD3-BMI1R4GMX3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms