Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 RPS24P13-201ENST00000442520 397 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 FABP5P15-201ENST00000453566 214 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 PPP1R2P5-201ENST00000457256 603 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AC146507.2-201ENST00000460608 476 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 RN7SL863P-201ENST00000462370 296 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 RPL7P43-201ENST00000478876 753 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 RNA5SP341-201ENST00000516261 117 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU6-1088P-201ENST00000516850 104 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AC090136.1-201ENST00000520009 240 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AC090115.3-201ENST00000553218 849 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 MIR4513-201ENST00000581077 86 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AL138889.2-201ENST00000603883 242 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AL670379.10-201ENST00000604330 253 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AC113139.1-201ENST00000605049 239 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AL670379.9-201ENST00000605428 253 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AC093732.2-201ENST00000607950 274 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 FTX_3.1-201ENST00000610451 147 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AC103705.1-201ENST00000619013 241 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 MTND5P7-201ENST00000413558 1798 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 AL359693.1-201ENST00000614959 2407 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.67-201ENST00000362870 100 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU6-82P-201ENST00000363970 107 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU6-270P-201ENST00000364131 105 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 RNA5SP219-201ENST00000390940 113 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 SNORD70.1-201ENST00000391007 85 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 RNA5SP252-201ENST00000391131 119 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 ARL5AP1-201ENST00000418991 388 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AC099548.1-201ENST00000421443 426 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AL160275.3-201ENST00000423876 471 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AC236972.2-201ENST00000434979 310 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AC010099.1-201ENST00000455434 375 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AL031183.1-201ENST00000457667 207 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AC006445.1-201ENST00000491925 405 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 SUMO2P6-201ENST00000505273 288 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU2-69P-201ENST00000516061 100 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 MTCO3P23-201ENST00000561363 289 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 LARP7P3-201ENST00000579888 337 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 FAM157A-202ENST00000615155 405 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AC099506.2-201ENST00000623074 221 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 AC093831.2-201ENST00000624393 3427 ntBASIC3.18□□□□□ -1.9
NCKIPSDQ9NZQ3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.326-201ENST00000365176 113 ntBASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.384-201ENST00000383909 102 ntBASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU1-101P-201ENST00000391171 127 ntBASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 COTL1P1-201ENST00000422309 375 ntBASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 MTCYBP6-201ENST00000441810 138 ntBASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 AC091179.1-201ENST00000461606 579 ntBASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 AC087884.1-201ENST00000469738 328 ntBASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU6-189P-201ENST00000516120 101 ntBASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 AP005639.2-201ENST00000527592 928 ntBASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 AL121821.2-201ENST00000556081 394 ntBASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 H3F3AP1-201ENST00000559984 334 ntBASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 AC022432.1-201ENST00000595739 310 ntBASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 ATP1B3P1-201ENST00000605365 821 ntBASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 AL022345.1-201ENST00000607292 135 ntBASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 AC104237.2-201ENST00000612456 443 ntBASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.17□□□□□ -1.9
NCKIPSDQ9NZQ3 MIR622-201ENST00000638396 96 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms