Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
RNF41Q9H4P4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.38□□□□□ -2.03
RNF41Q9H4P4 RNU6-1103P-201ENST00000384150 107 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 MIR301A-201ENST00000385261 86 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 RNA5SP354-201ENST00000391247 136 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.38□□□□□ -2.03
RNF41Q9H4P4 OR51A5P-201ENST00000415429 942 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 USP9YP27-201ENST00000418455 438 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AL353729.1-201ENST00000425044 720 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AC027124.2-201ENST00000428249 105 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.38□□□□□ -2.03
RNF41Q9H4P4 HMGB1P9-201ENST00000429856 646 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.38□□□□□ -2.03
RNF41Q9H4P4 VN1R108P-201ENST00000431580 830 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 RPS15AP5-201ENST00000436276 388 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 RPS15AP7-201ENST00000439294 405 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AC079781.2-201ENST00000446424 169 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 HMGN2P10-201ENST00000448085 265 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AL021397.1-201ENST00000451806 248 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AC107626.1-201ENST00000471084 183 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 RNU1-40P-201ENST00000516816 164 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 RNU1-97P-201ENST00000516872 164 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 RN7SKP40-201ENST00000517211 242 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AC024909.2-201ENST00000553035 286 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 CKAP2P1-201ENST00000555477 2049 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AC021739.1-201ENST00000559631 174 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AL391840.1-201ENST00000571144 367 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AC103987.3-201ENST00000582071 292 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 MIR5194-201ENST00000582634 120 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AL139286.2-201ENST00000606838 396 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 Z99129.1-201ENST00000612510 255 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 AL359547.2-201ENST00000615810 418 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 UCA1.1-201ENST00000620952 75 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 MIR203B-201ENST00000636080 86 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
RNF41Q9H4P4 ZNF519P1-201ENST00000449011 1626 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.37□□□□□ -2.03
RNF41Q9H4P4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.37□□□□□ -2.03
RNF41Q9H4P4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.37□□□□□ -2.03
RNF41Q9H4P4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RNF41Q9H4P4 RNU1-105P-201ENST00000363470 161 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 Y_RNA.576-201ENST00000384781 102 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 Y_RNA.582-201ENST00000391023 95 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 SNORA40C-201ENST00000391285 128 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 RNU2-2P-201ENST00000410396 191 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 RNU6-193P-201ENST00000410977 107 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.37□□□□□ -2.03
RNF41Q9H4P4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.37□□□□□ -2.03
RNF41Q9H4P4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.37□□□□□ -2.03
RNF41Q9H4P4 AL365338.1-201ENST00000422282 858 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 AL160275.3-201ENST00000423876 471 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 CALM2P2-201ENST00000428512 440 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RNF41Q9H4P4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.37□□□□□ -2.03
RNF41Q9H4P4 USP9YP8-201ENST00000441913 500 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.37□□□□□ -2.03
RNF41Q9H4P4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.37□□□□□ -2.03
RNF41Q9H4P4 RPL37P6-201ENST00000460682 294 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 RPL31P41-201ENST00000477967 372 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 AC022493.1-201ENST00000492984 337 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 AC026801.1-201ENST00000497178 464 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 RNU6-405P-201ENST00000516637 110 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 RNU6-143P-201ENST00000516942 93 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 RNU6-410P-201ENST00000517006 107 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 RNU6-1183P-201ENST00000517054 60 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 SUB1P1-201ENST00000524415 382 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 RANP3-201ENST00000530970 276 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.37□□□□□ -2.03
RNF41Q9H4P4 MTND1P15-201ENST00000579262 949 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 AC126118.1-201ENST00000607744 628 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 U2.15-201ENST00000611544 191 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 U2.16-201ENST00000613119 191 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 U2.12-201ENST00000613778 191 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 U2.20-201ENST00000613956 192 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 U2.9-201ENST00000615427 191 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 U2.11-201ENST00000616345 191 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 U2.2-201ENST00000616535 191 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 U2.3-201ENST00000617785 191 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 U2.19-201ENST00000618602 191 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 RNU2-1-201ENST00000618664 191 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 U2.6-201ENST00000619225 191 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 U2.5-201ENST00000619465 191 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 U2.10-201ENST00000620268 191 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 AC011155.2-201ENST00000623202 216 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 AC009161.2-201ENST00000624626 138 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 AL157786.1-207ENST00000627771 695 ntBASIC2.37□□□□□ -2.03
RNF41Q9H4P4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.37□□□□□ -2.03
RNF41Q9H4P4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RNF41Q9H4P4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RNF41Q9H4P4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RNF41Q9H4P4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RNF41Q9H4P4 SNORD114-1-201ENST00000362705 72 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 Y_RNA.194-201ENST00000363985 102 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms