Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RPL36AP48-201ENST00000485521 314 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 AC015911.1-201ENST00000495111 156 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 AC006499.6-201ENST00000511169 607 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 RN7SKP272-201ENST00000516988 232 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 AC006064.5-201ENST00000541782 248 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 GNAI2P1-201ENST00000541815 315 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 AC021231.3-201ENST00000558497 370 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 AC106785.1-201ENST00000565935 262 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 AL359198.2-201ENST00000611836 194 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 RNU6-1159P-201ENST00000362933 107 ntBASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 RNU6-1032P-201ENST00000384100 107 ntBASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 U1.1-201ENST00000384101 164 ntBASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 RNY1P14-201ENST00000384426 108 ntBASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 RNU2-23P-201ENST00000410545 195 ntBASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 AC004383.1-201ENST00000438135 289 ntBASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 GSTA11P-201ENST00000452866 669 ntBASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 RPS4XP22-201ENST00000480755 780 ntBASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 RAC1P5-201ENST00000512182 576 ntBASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 AC026726.1-201ENST00000512859 601 ntBASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 RNU6-327P-201ENST00000516270 127 ntBASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 AC069240.1-201ENST00000548774 375 ntBASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 AL355802.3-201ENST00000607571 545 ntBASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 AC007485.1-201ENST00000616755 206 ntBASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
TRAIPQ9BWF2 AL049781.1-201ENST00000623195 3585 ntBASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 AC108032.1-201ENST00000416706 207 ntBASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 AC009414.1-201ENST00000427200 443 ntBASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 snoU13.30-201ENST00000458951 104 ntBASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 RNU6-567P-201ENST00000516746 107 ntBASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 MRPS36P4-201ENST00000534436 298 ntBASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 HSBP1P1-201ENST00000555205 166 ntBASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 AC005034.5-201ENST00000604219 466 ntBASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 AL360085.1-201ENST00000604713 532 ntBASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 MIR1244-1-201ENST00000612829 85 ntBASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 MIR1244-3-201ENST00000635744 85 ntBASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 MIR1244-2-201ENST00000636449 85 ntBASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 MIR1244-4-202ENST00000636813 85 ntBASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TRAIPQ9BWF2 AP000560.1-201ENST00000624150 1937 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 AC091564.4-201ENST00000533934 2194 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 MIR372-201ENST00000362225 67 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 RNU6-1010P-201ENST00000362757 107 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 Y_RNA.148-201ENST00000363557 117 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 RNU6-1083P-201ENST00000384022 107 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 RNU6-1160P-201ENST00000384546 104 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 MIR628-201ENST00000385229 95 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 MRPL42P3-201ENST00000401492 326 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 RNA5SP494-201ENST00000410653 129 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 AC004552.1-201ENST00000419089 348 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 RBMY1KP-201ENST00000423480 476 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 MRPS18CP6-201ENST00000423587 223 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 RPS26P3-201ENST00000470205 348 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 AC090543.2-201ENST00000483963 348 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 AC004057.1-201ENST00000485827 348 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 AC026402.1-201ENST00000513642 170 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 RNU6-1045P-201ENST00000516321 107 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 AC109329.1-201ENST00000518744 317 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 CYP4A43P-201ENST00000568156 121 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 AC104581.2-201ENST00000572227 430 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 MIR5701-3-201ENST00000578890 82 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 MIR5701-1-201ENST00000585138 82 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 AC006077.1-201ENST00000604746 343 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 SNORA51-201ENST00000606420 132 ntBASIC4.6□□□□□ -1.67
TRAIPQ9BWF2 AC064801.1-201ENST00000612025 407 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms