Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 RNA5SP454-201ENST00000517231 127 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 AC109479.2-201ENST00000517842 174 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 AC105029.1-201ENST00000520250 669 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.05□□□□□ -1.92
NPAS1Q99742 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.05□□□□□ -1.92
NPAS1Q99742 MIR4506-201ENST00000584693 77 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 AC005261.5-201ENST00000596280 355 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 AL133393.1-201ENST00000603277 287 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 MIR6134-201ENST00000617606 109 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.05□□□□□ -1.92
NPAS1Q99742 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NPAS1Q99742 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.05□□□□□ -1.92
NPAS1Q99742 AC110774.1-201ENST00000623567 2018 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NPAS1Q99742 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NPAS1Q99742 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.04□□□□□ -1.92
NPAS1Q99742 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NPAS1Q99742 MTND4P29-201ENST00000503122 1372 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 MIR208A-201ENST00000362287 71 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 Y_RNA.184-201ENST00000363884 108 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 RNU6-827P-201ENST00000365553 106 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 RNU6-1329P-201ENST00000365664 107 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 CD24P4-201ENST00000382840 243 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 Y_RNA.529-201ENST00000384586 119 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 SNORD56-201ENST00000413522 71 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.04□□□□□ -1.92
NPAS1Q99742 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.04□□□□□ -1.92
NPAS1Q99742 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.04□□□□□ -1.92
NPAS1Q99742 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.04□□□□□ -1.92
NPAS1Q99742 UBE2V1P4-201ENST00000425374 344 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.04□□□□□ -1.92
NPAS1Q99742 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.04□□□□□ -1.92
NPAS1Q99742 AC124916.1-201ENST00000444020 547 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NPAS1Q99742 AC130509.1-201ENST00000464158 433 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.04□□□□□ -1.92
NPAS1Q99742 AC018437.1-201ENST00000492214 406 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 RPS27P27-201ENST00000498779 255 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 FCF1P8-201ENST00000510322 597 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 RN7SKP24-201ENST00000515888 284 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 Y_RNA.675-201ENST00000516389 149 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 AC022634.1-201ENST00000520765 532 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 COPS8P3-201ENST00000526024 482 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 AP005597.4-201ENST00000526762 229 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.04□□□□□ -1.92
NPAS1Q99742 AC006199.1-201ENST00000548728 219 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 AC025281.1-201ENST00000567026 265 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 RPS3AP23-202ENST00000574601 686 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 FGF7P1-201ENST00000582820 288 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 AC023043.2-201ENST00000589678 1026 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 AP000787.2-201ENST00000604432 568 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 AL162713.1-201ENST00000604480 262 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 ELOCP5-201ENST00000604924 333 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 AC021646.1-201ENST00000605469 484 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 AL121917.1-203ENST00000605534 577 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 AC019176.2-201ENST00000611579 315 ntBASIC3.04□□□□□ -1.92
NPAS1Q99742 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NPAS1Q99742 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
NPAS1Q99742 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
NPAS1Q99742 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NPAS1Q99742 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NPAS1Q99742 AL049781.1-201ENST00000623195 3585 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
NPAS1Q99742 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 SNORA63.1-201ENST00000362493 131 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NPAS1Q99742 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NPAS1Q99742 Y_RNA.384-201ENST00000383909 102 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 RNU6-933P-201ENST00000384424 107 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 SAR1AP2-201ENST00000392696 594 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 RN7SKP111-201ENST00000410349 271 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 RN7SKP123-201ENST00000410732 291 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 AC023141.4-201ENST00000412031 328 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 AL356968.1-201ENST00000416622 474 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.03□□□□□ -1.92
NPAS1Q99742 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.03□□□□□ -1.92
NPAS1Q99742 AL591043.1-201ENST00000432461 424 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 RPS15AP10-201ENST00000432472 382 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.03□□□□□ -1.92
NPAS1Q99742 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.03□□□□□ -1.92
NPAS1Q99742 AL441985.1-201ENST00000457727 251 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 AC091153.1-201ENST00000466297 402 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 MTCO1P29-201ENST00000496868 288 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.03□□□□□ -1.92
NPAS1Q99742 SLC25A15P5-201ENST00000508033 253 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 SNORA64.4-201ENST00000516632 81 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.03□□□□□ -1.92
NPAS1Q99742 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.03□□□□□ -1.92
NPAS1Q99742 AC103996.1-201ENST00000555468 102 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 AC100830.2-201ENST00000581636 240 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.03□□□□□ -1.92
NPAS1Q99742 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.03□□□□□ -1.92
NPAS1Q99742 AC104985.2-201ENST00000620598 500 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 AC244517.12-201ENST00000623581 663 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 AC008264.2-201ENST00000610193 3731 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 FAM35CP-201ENST00000554755 2470 ntBASIC3.03□□□□□ -1.92
NPAS1Q99742 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms