Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AL163973.1-201ENST00000484753 577 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 MTAPP1-201ENST00000489154 819 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AC109927.2-201ENST00000506416 303 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.19□□□□□ -1.9
SIN3AQ96ST3 RANP3-201ENST00000530970 276 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AL162413.1-201ENST00000603198 110 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 HSPE1P7-201ENST00000604681 321 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AC008962.1-201ENST00000605729 304 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AC009831.4-201ENST00000620744 325 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 YWHAEP7-203ENST00000622054 312 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 FER-210ENST00000628534 558 ntTSL 5 BASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.19□□□□□ -1.9
SIN3AQ96ST3 Z99571.1-201ENST00000636677 394 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 ZNF720P1-201ENST00000562403 1939 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 ZNF658B-202ENST00000615961 3375 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.18□□□□□ -1.9
SIN3AQ96ST3 RNU6-1287P-201ENST00000362914 107 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 RNU6-270P-201ENST00000364131 105 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 SNORA4.3-201ENST00000365564 137 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 RNU6-217P-201ENST00000384164 104 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 RNU6-1060P-201ENST00000384664 107 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 RNU1-101P-201ENST00000391171 127 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 MIR1277-201ENST00000408536 78 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.18□□□□□ -1.9
SIN3AQ96ST3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.18□□□□□ -1.9
SIN3AQ96ST3 AL160275.3-201ENST00000423876 471 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 GTF2IP20-201ENST00000431663 360 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 SNRPEP4-201ENST00000435815 279 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 CECR9-201ENST00000453421 199 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 FAM92A1P2-202ENST00000504766 877 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 MTCO3P9-201ENST00000506989 781 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.18□□□□□ -1.9
SIN3AQ96ST3 AMZ2P1-203ENST00000565833 850 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 AC092325.1-201ENST00000566449 554 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 MIR4513-201ENST00000581077 86 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.18□□□□□ -1.9
SIN3AQ96ST3 BNIP3P9-201ENST00000603714 553 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 AC008945.2-201ENST00000606056 604 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 CKAP2P1-201ENST00000555477 2049 ntBASIC3.18□□□□□ -1.9
SIN3AQ96ST3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SIN3AQ96ST3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SIN3AQ96ST3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.17□□□□□ -1.9
SIN3AQ96ST3 HSPA8P4-201ENST00000511877 1920 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 RNU6-451P-201ENST00000362921 107 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 Y_RNA.89-201ENST00000363031 102 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 RNU6-534P-201ENST00000364877 106 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 SNORA64-201ENST00000384674 134 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 RNU2-29P-201ENST00000410423 189 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 EEF1A1P40-201ENST00000412883 573 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 AC104332.2-201ENST00000429959 156 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 AL591704.1-201ENST00000432574 275 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 DPPA3P1-201ENST00000448050 469 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 AL590664.1-201ENST00000448065 339 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 ANXA2P1-201ENST00000505539 926 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.17□□□□□ -1.9
SIN3AQ96ST3 RNA5SP401-201ENST00000515920 127 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.17□□□□□ -1.9
SIN3AQ96ST3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.17□□□□□ -1.9
SIN3AQ96ST3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.17□□□□□ -1.9
SIN3AQ96ST3 MTND1P35-201ENST00000526739 508 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 HIF1AP1-201ENST00000553642 175 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 SNORA59B-202ENST00000578183 701 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.17□□□□□ -1.9
SIN3AQ96ST3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.17□□□□□ -1.9
SIN3AQ96ST3 uc_338.11-201ENST00000619132 160 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.17□□□□□ -1.9
SIN3AQ96ST3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SIN3AQ96ST3 TPTE2P4-201ENST00000258589 1605 ntBASIC3.17□□□□□ -1.9
SIN3AQ96ST3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SIN3AQ96ST3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SIN3AQ96ST3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SIN3AQ96ST3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SIN3AQ96ST3 RNY3P3-201ENST00000363816 102 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 RNU6-116P-201ENST00000384042 109 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 Y_RNA.453-201ENST00000384223 109 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 RNU6-140P-201ENST00000384566 108 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 SNORA1.3-201ENST00000384676 136 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 RNU6-1068P-201ENST00000410958 103 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 CALM2P2-201ENST00000428512 440 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 AL139415.2-201ENST00000431968 163 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 GPM6BP2-201ENST00000432046 144 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 SEPT14P3-201ENST00000439401 183 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 AL732372.2-207ENST00000445840 183 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 GPM6BP1-201ENST00000446387 144 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 AC104058.1-201ENST00000448028 297 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 SEPT14P2-201ENST00000453405 183 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 RNU7-180P-201ENST00000459240 63 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 RPL37P6-201ENST00000460682 294 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 RPS29P25-201ENST00000481709 171 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 GZMAP1-201ENST00000503054 631 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 AC009901.1-201ENST00000506703 541 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SIN3AQ96ST3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.16□□□□□ -1.9
SIN3AQ96ST3 SEPT14P4-201ENST00000513445 186 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 RNU6-928P-201ENST00000516876 104 ntBASIC3.16□□□□□ -1.9
SIN3AQ96ST3 FO082796.1-201ENST00000523795 183 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms