Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 AC104058.1-201ENST00000448028 297 ntBASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 RPL9P6-201ENST00000492764 598 ntBASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 EIF4EP3-201ENST00000498782 656 ntBASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 AC098591.2-201ENST00000510152 315 ntBASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 Y_RNA.655-201ENST00000515919 96 ntBASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 RNU6-685P-201ENST00000517088 95 ntBASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 MIR4782-201ENST00000577987 79 ntBASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 AC090616.3-201ENST00000582184 217 ntBASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 OR1M4P-201ENST00000589199 287 ntBASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 AC015540.1-201ENST00000615828 501 ntBASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 ADAM3A-203ENST00000461344 2157 ntBASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 MTND5P6-201ENST00000422338 1798 ntBASIC2.61□□□□□ -1.99
CCDC60Q8IWA6 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 Y_RNA.41-201ENST00000362646 102 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 VTRNA1-1-201ENST00000363120 99 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 Y_RNA.409-201ENST00000383990 98 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 SNORD116-4-201ENST00000384733 96 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 RNU6-550P-201ENST00000391057 101 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 OR6C66P-201ENST00000414917 930 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 AL353193.1-201ENST00000421444 268 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 CALM2P2-201ENST00000428512 440 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 AC018634.1-201ENST00000437554 401 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 MTND1P18-201ENST00000448191 573 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 MTATP6P7-201ENST00000453315 681 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 AC233279.1-201ENST00000455300 423 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 AC091435.1-201ENST00000505442 584 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 RPL37P25-201ENST00000507308 276 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 RNU6-703P-201ENST00000516946 107 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 RNU6-1183P-201ENST00000517054 60 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 NACAP3-201ENST00000552100 481 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 AC025281.1-201ENST00000567026 265 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 MIR548AC-201ENST00000585049 88 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 AC012507.3-201ENST00000603556 477 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 AL138889.2-201ENST00000603883 242 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 AC116312.1-201ENST00000606841 314 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 MIR3199-2-201ENST00000636243 86 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 HSPA8P4-201ENST00000511877 1920 ntBASIC2.6□□□□□ -1.99
CCDC60Q8IWA6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 SNORA75B-201ENST00000384053 137 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 RNU6-606P-201ENST00000384721 111 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 RN7SKP223-201ENST00000410582 62 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AL031779.1-201ENST00000415663 330 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 RPS15AP28-201ENST00000435088 386 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 BRK1P2-201ENST00000442875 223 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AL078601.1-201ENST00000444542 271 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AL583843.1-201ENST00000456070 346 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 RNU7-63P-201ENST00000459054 62 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AC022493.1-201ENST00000492984 337 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 SUB1P1-201ENST00000524415 382 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AC022880.1-201ENST00000534017 973 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 GLYCAM1-201ENST00000546596 285 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 MIR5007-201ENST00000583098 95 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AC008752.3-201ENST00000588113 712 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AC012557.2-201ENST00000605919 418 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AC139792.3-201ENST00000623525 224 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 AC068137.4-201ENST00000638485 296 ntBASIC2.59□□□□□ -1.99
CCDC60Q8IWA6 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC60Q8IWA6 SNORD3E-201ENST00000362899 217 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 RNU6-1179P-201ENST00000384667 107 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 MIR578-201ENST00000384828 96 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 HMGN2P35-201ENST00000412164 270 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 AC007064.1-201ENST00000412238 351 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 EEF1A1P40-201ENST00000412883 573 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms