Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 EEF1A1P40-201ENST00000412883 573 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 RPL7P10-201ENST00000417407 739 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 AL513185.2-201ENST00000425543 193 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 ZNF863P-201ENST00000426746 417 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 SNRPEP4-201ENST00000435815 279 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 FABP5P15-201ENST00000453566 214 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 SUMO2P6-201ENST00000505273 288 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 RNU6-1315P-201ENST00000517187 99 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 IGKV3-31-201ENST00000523109 329 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 AC078814.3-201ENST00000553036 491 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 MIR1273C-201ENST00000578669 77 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 MIR548AC-201ENST00000585049 88 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 AC004805.2-201ENST00000605382 482 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 AC008962.1-201ENST00000605729 304 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 AC093913.1-201ENST00000614178 329 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 SNORA72.1-201ENST00000363485 129 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 RNU6-434P-201ENST00000384376 107 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 MIR591-201ENST00000385290 95 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 MIR764-201ENST00000390811 85 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 RPS4XP3-201ENST00000398541 413 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 RN7SKP223-201ENST00000410582 62 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 Y_RNA.615-201ENST00000410769 117 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 AC022028.1-201ENST00000412054 408 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 RPL21P90-201ENST00000415692 466 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 AC012498.1-201ENST00000424037 437 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 AC092047.1-201ENST00000424997 240 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 AL603825.1-201ENST00000438481 80 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 RPS15AP27-201ENST00000449183 343 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 UQCRHP3-201ENST00000451503 251 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 SRIP1-201ENST00000489235 288 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 MTCO3P9-201ENST00000506989 781 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 AC104136.1-201ENST00000512969 394 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 AC243972.3-201ENST00000539655 198 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 TRAV37-201ENST00000553906 342 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 AC015712.3-201ENST00000559380 164 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 AC005730.3-201ENST00000583067 366 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 U4.3-201ENST00000621047 82 ntBASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRT28Q7Z3Y7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 Y_RNA.33-201ENST00000362591 102 ntBASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 SNORA1.3-201ENST00000384676 136 ntBASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 AL162578.1-201ENST00000406202 378 ntBASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 RPL21P111-201ENST00000418453 477 ntBASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 AC007547.1-201ENST00000462177 490 ntBASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 AL135752.1-201ENST00000479477 471 ntBASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 AC114786.4-201ENST00000508771 728 ntBASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 RN7SKP24-201ENST00000515888 284 ntBASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 AL157871.3-201ENST00000557231 293 ntBASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 AC011712.1-201ENST00000588959 234 ntBASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 Z82243.1-201ENST00000609432 473 ntBASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 U2.17-201ENST00000611454 95 ntBASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 MIR6076-201ENST00000617521 113 ntBASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
KRT28Q7Z3Y7 MTND4P35-201ENST00000604257 1375 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 Y_RNA.378-201ENST00000365652 113 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 RNU6-395P-201ENST00000365662 106 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 SNORA32.2-201ENST00000384049 122 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 RNU6-45P-201ENST00000384471 107 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 MIR1289-2-201ENST00000408360 111 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 RNU6-1025P-201ENST00000410629 104 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 SNRPEP9-201ENST00000436794 238 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 HMGN2P26-201ENST00000463169 339 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 AC012181.1-201ENST00000479895 423 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms