Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RNA5SP330-201ENST00000517096 96 ntBASIC0.47□□□□□ -2.33
UBA52P62987 RNU6-667P-201ENST00000517186 102 ntBASIC0.47□□□□□ -2.33
UBA52P62987 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.47□□□□□ -2.33
UBA52P62987 AP003066.2-201ENST00000529375 555 ntBASIC0.47□□□□□ -2.33
UBA52P62987 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.47□□□□□ -2.33
UBA52P62987 CYP3A52P-201ENST00000563326 91 ntBASIC0.47□□□□□ -2.33
UBA52P62987 MTCO2P2-201ENST00000591258 225 ntBASIC0.47□□□□□ -2.33
UBA52P62987 AL022345.2-201ENST00000606307 135 ntBASIC0.47□□□□□ -2.33
UBA52P62987 AC073569.3-201ENST00000619055 682 ntBASIC0.47□□□□□ -2.33
UBA52P62987 MIR8063-201ENST00000621930 81 ntBASIC0.47□□□□□ -2.33
UBA52P62987 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
UBA52P62987 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
UBA52P62987 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
UBA52P62987 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
UBA52P62987 RNU1-58P-201ENST00000362413 163 ntBASIC0.46□□□□□ -2.34
UBA52P62987 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.46□□□□□ -2.34
UBA52P62987 AL139397.2-201ENST00000404529 772 ntBASIC0.46□□□□□ -2.34
UBA52P62987 AL117342.1-201ENST00000404861 406 ntBASIC0.46□□□□□ -2.34
UBA52P62987 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.46□□□□□ -2.34
UBA52P62987 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.46□□□□□ -2.34
UBA52P62987 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.46□□□□□ -2.34
UBA52P62987 SNORA25.11-201ENST00000515935 105 ntBASIC0.46□□□□□ -2.34
UBA52P62987 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
UBA52P62987 NRON-201ENST00000517270 370 ntBASIC0.46□□□□□ -2.34
UBA52P62987 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.46□□□□□ -2.34
UBA52P62987 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.46□□□□□ -2.34
UBA52P62987 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.46□□□□□ -2.34
UBA52P62987 NDUFA8P1-201ENST00000605525 367 ntBASIC0.46□□□□□ -2.34
UBA52P62987 AC087045.1-201ENST00000605856 382 ntBASIC0.46□□□□□ -2.34
UBA52P62987 BX284668.6-201ENST00000606899 438 ntBASIC0.46□□□□□ -2.34
UBA52P62987 AF129408.1-201ENST00000608767 431 ntBASIC0.46□□□□□ -2.34
UBA52P62987 MIR8087-201ENST00000612745 78 ntBASIC0.46□□□□□ -2.34
UBA52P62987 MIR8065-201ENST00000620577 100 ntBASIC0.46□□□□□ -2.34
UBA52P62987 AC104820.1-201ENST00000624183 307 ntBASIC0.46□□□□□ -2.34
UBA52P62987 ELL2P3-201ENST00000457883 1602 ntBASIC0.46□□□□□ -2.34
UBA52P62987 MTND4P16-201ENST00000466108 1367 ntBASIC0.45□□□□□ -2.34
UBA52P62987 ENSAP3-201ENST00000312710 333 ntBASIC0.45□□□□□ -2.34
UBA52P62987 MIR330-201ENST00000362196 94 ntBASIC0.45□□□□□ -2.34
UBA52P62987 RNU6-492P-201ENST00000363035 104 ntBASIC0.45□□□□□ -2.34
UBA52P62987 RNU6-414P-201ENST00000363705 104 ntBASIC0.45□□□□□ -2.34
UBA52P62987 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
UBA52P62987 Y_RNA.258-201ENST00000364613 105 ntBASIC0.45□□□□□ -2.34
UBA52P62987 FTH1P15-201ENST00000406984 280 ntBASIC0.45□□□□□ -2.34
UBA52P62987 MTCYBP32-201ENST00000427945 1084 ntBASIC0.45□□□□□ -2.34
UBA52P62987 AC007919.1-201ENST00000429380 217 ntBASIC0.45□□□□□ -2.34
UBA52P62987 AL591043.1-201ENST00000432461 424 ntBASIC0.45□□□□□ -2.34
UBA52P62987 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.45□□□□□ -2.34
UBA52P62987 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
UBA52P62987 MTCO3P2-201ENST00000457365 171 ntBASIC0.45□□□□□ -2.34
UBA52P62987 AC010409.1-201ENST00000487382 476 ntBASIC0.45□□□□□ -2.34
UBA52P62987 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.45□□□□□ -2.34
UBA52P62987 AC021146.8-201ENST00000507455 733 ntBASIC0.45□□□□□ -2.34
UBA52P62987 RNVU1-2-201ENST00000516326 135 ntBASIC0.45□□□□□ -2.34
UBA52P62987 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.45□□□□□ -2.34
UBA52P62987 AC008127.2-201ENST00000549925 1075 ntBASIC0.45□□□□□ -2.34
UBA52P62987 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.45□□□□□ -2.34
UBA52P62987 LINC00557-201ENST00000563184 1279 ntBASIC0.45□□□□□ -2.34
UBA52P62987 AC090079.2-201ENST00000575289 768 ntBASIC0.45□□□□□ -2.34
UBA52P62987 GAS5-AS1-201ENST00000602767 694 ntBASIC0.45□□□□□ -2.34
UBA52P62987 AL022345.1-201ENST00000607292 135 ntBASIC0.45□□□□□ -2.34
UBA52P62987 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.45□□□□□ -2.34
UBA52P62987 AC091925.1-201ENST00000623204 462 ntBASIC0.45□□□□□ -2.34
UBA52P62987 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
UBA52P62987 SNORA4.1-201ENST00000364263 144 ntBASIC0.44□□□□□ -2.34
UBA52P62987 RNU6-716P-201ENST00000365621 103 ntBASIC0.44□□□□□ -2.34
UBA52P62987 SNORA51.6-201ENST00000384151 125 ntBASIC0.44□□□□□ -2.34
UBA52P62987 SNORA25-201ENST00000384384 134 ntBASIC0.44□□□□□ -2.34
UBA52P62987 SNORD14D-201ENST00000384390 87 ntBASIC0.44□□□□□ -2.34
UBA52P62987 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
UBA52P62987 NCOR1P3-201ENST00000420479 303 ntBASIC0.44□□□□□ -2.34
UBA52P62987 EIF1P1-201ENST00000421436 341 ntBASIC0.44□□□□□ -2.34
UBA52P62987 PPP1R11P2-201ENST00000423543 382 ntBASIC0.44□□□□□ -2.34
UBA52P62987 AL358176.2-201ENST00000425769 204 ntBASIC0.44□□□□□ -2.34
UBA52P62987 AC108078.1-201ENST00000508073 725 ntBASIC0.44□□□□□ -2.34
UBA52P62987 RNU6-197P-201ENST00000516680 100 ntBASIC0.44□□□□□ -2.34
UBA52P62987 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
UBA52P62987 AC092451.2-201ENST00000538746 658 ntBASIC0.44□□□□□ -2.34
UBA52P62987 AC008088.1-201ENST00000580993 280 ntBASIC0.44□□□□□ -2.34
UBA52P62987 AC079610.2-201ENST00000604818 690 ntBASIC0.44□□□□□ -2.34
UBA52P62987 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.44□□□□□ -2.34
UBA52P62987 AC107075.1-201ENST00000613695 314 ntBASIC0.44□□□□□ -2.34
UBA52P62987 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.44□□□□□ -2.34
UBA52P62987 AL109620.1-201ENST00000618738 1197 ntBASIC0.44□□□□□ -2.34
UBA52P62987 AL109933.3-201ENST00000619095 188 ntBASIC0.44□□□□□ -2.34
UBA52P62987 AL138713.1-201ENST00000624026 2130 ntBASIC0.44□□□□□ -2.34
UBA52P62987 MTCO1P23-201ENST00000415223 1526 ntBASIC0.43□□□□□ -2.34
UBA52P62987 Y_RNA.85-201ENST00000363014 111 ntBASIC0.43□□□□□ -2.34
UBA52P62987 RNU6-1339P-201ENST00000363574 91 ntBASIC0.43□□□□□ -2.34
UBA52P62987 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
UBA52P62987 MIR608-201ENST00000384820 100 ntBASIC0.43□□□□□ -2.34
UBA52P62987 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.43□□□□□ -2.34
UBA52P62987 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.43□□□□□ -2.34
UBA52P62987 AL035666.1-201ENST00000446195 348 ntBASIC0.43□□□□□ -2.34
UBA52P62987 MEMO1P3-201ENST00000459811 302 ntBASIC0.43□□□□□ -2.34
UBA52P62987 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
UBA52P62987 AC087477.1-201ENST00000465747 340 ntBASIC0.43□□□□□ -2.34
UBA52P62987 RPS27P22-201ENST00000478056 241 ntBASIC0.43□□□□□ -2.34
UBA52P62987 RAP1BP2-201ENST00000478270 544 ntBASIC0.43□□□□□ -2.34
UBA52P62987 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.43□□□□□ -2.34
UBA52P62987 MIR3167-201ENST00000579623 85 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms