Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.93□□□□□ -2.1
NCK1P16333 HMGN2P38-201ENST00000423806 265 ntBASIC1.93□□□□□ -2.1
NCK1P16333 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.93□□□□□ -2.1
NCK1P16333 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.93□□□□□ -2.1
NCK1P16333 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.93□□□□□ -2.1
NCK1P16333 GPM6BP3-201ENST00000442797 145 ntBASIC1.93□□□□□ -2.1
NCK1P16333 snoU13.14-201ENST00000459372 104 ntBASIC1.93□□□□□ -2.1
NCK1P16333 AC107032.1-201ENST00000485945 480 ntBASIC1.93□□□□□ -2.1
NCK1P16333 AC140059.1-201ENST00000489238 361 ntBASIC1.93□□□□□ -2.1
NCK1P16333 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.93□□□□□ -2.1
NCK1P16333 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.93□□□□□ -2.1
NCK1P16333 AC108078.2-201ENST00000510750 236 ntBASIC1.93□□□□□ -2.1
NCK1P16333 AF131216.2-201ENST00000512316 564 ntBASIC1.93□□□□□ -2.1
NCK1P16333 MIR514B-201ENST00000516774 80 ntBASIC1.93□□□□□ -2.1
NCK1P16333 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.93□□□□□ -2.1
NCK1P16333 AC009094.1-201ENST00000564443 426 ntBASIC1.93□□□□□ -2.1
NCK1P16333 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.93□□□□□ -2.1
NCK1P16333 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.93□□□□□ -2.1
NCK1P16333 MIR3935-201ENST00000583472 104 ntBASIC1.93□□□□□ -2.1
NCK1P16333 AC090616.2-202ENST00000584248 222 ntBASIC1.93□□□□□ -2.1
NCK1P16333 AC007229.1-201ENST00000590455 412 ntBASIC1.93□□□□□ -2.1
NCK1P16333 RPL30P11-203ENST00000598995 310 ntBASIC1.93□□□□□ -2.1
NCK1P16333 BNIP3P30-201ENST00000601184 574 ntBASIC1.93□□□□□ -2.1
NCK1P16333 AC126118.1-201ENST00000607744 628 ntBASIC1.93□□□□□ -2.1
NCK1P16333 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.93□□□□□ -2.1
NCK1P16333 uc_338.15-201ENST00000615470 191 ntBASIC1.93□□□□□ -2.1
NCK1P16333 AC027807.2-201ENST00000616099 408 ntBASIC1.93□□□□□ -2.1
NCK1P16333 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.93□□□□□ -2.1
NCK1P16333 AL162373.1-201ENST00000620433 407 ntBASIC1.93□□□□□ -2.1
NCK1P16333 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
NCK1P16333 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NCK1P16333 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NCK1P16333 OR4G2P-201ENST00000328113 903 ntBASIC1.92□□□□□ -2.1
NCK1P16333 SNORA16B-201ENST00000364674 135 ntBASIC1.92□□□□□ -2.1
NCK1P16333 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NCK1P16333 MIR186-201ENST00000384988 86 ntBASIC1.92□□□□□ -2.1
NCK1P16333 RPS3AP36-201ENST00000398190 775 ntBASIC1.92□□□□□ -2.1
NCK1P16333 MTCYBP36-201ENST00000404146 440 ntBASIC1.92□□□□□ -2.1
NCK1P16333 RN7SKP284-201ENST00000411002 343 ntBASIC1.92□□□□□ -2.1
NCK1P16333 AL139156.1-201ENST00000412785 841 ntBASIC1.92□□□□□ -2.1
NCK1P16333 ELOCP4-201ENST00000420090 333 ntBASIC1.92□□□□□ -2.1
NCK1P16333 MTND4P20-201ENST00000424125 869 ntBASIC1.92□□□□□ -2.1
NCK1P16333 AC008267.5-201ENST00000424928 265 ntBASIC1.92□□□□□ -2.1
NCK1P16333 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NCK1P16333 AC012308.1-201ENST00000451232 178 ntBASIC1.92□□□□□ -2.1
NCK1P16333 AC018868.1-201ENST00000491307 315 ntBASIC1.92□□□□□ -2.1
NCK1P16333 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.92□□□□□ -2.1
NCK1P16333 AC114781.4-201ENST00000513707 639 ntBASIC1.92□□□□□ -2.1
NCK1P16333 FABP5P5-201ENST00000515537 406 ntBASIC1.92□□□□□ -2.1
NCK1P16333 SNORA25.11-201ENST00000515935 105 ntBASIC1.92□□□□□ -2.1
NCK1P16333 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.92□□□□□ -2.1
NCK1P16333 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.92□□□□□ -2.1
NCK1P16333 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
NCK1P16333 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
NCK1P16333 RPL21P5-201ENST00000554662 472 ntBASIC1.92□□□□□ -2.1
NCK1P16333 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.92□□□□□ -2.1
NCK1P16333 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NCK1P16333 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.91□□□□□ -2.1
NCK1P16333 MTND4P4-201ENST00000439033 1366 ntBASIC1.91□□□□□ -2.1
NCK1P16333 RNU6-858P-201ENST00000362436 107 ntBASIC1.91□□□□□ -2.1
NCK1P16333 RNU6-1159P-201ENST00000362933 107 ntBASIC1.91□□□□□ -2.1
NCK1P16333 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
NCK1P16333 RNU6-39P-201ENST00000384344 107 ntBASIC1.91□□□□□ -2.1
NCK1P16333 AL133475.1-201ENST00000404414 305 ntBASIC1.91□□□□□ -2.1
NCK1P16333 RAP1BP3-201ENST00000407180 549 ntBASIC1.91□□□□□ -2.1
NCK1P16333 SNORA11.4-201ENST00000408823 129 ntBASIC1.91□□□□□ -2.1
NCK1P16333 Y_RNA.598-201ENST00000410480 95 ntBASIC1.91□□□□□ -2.1
NCK1P16333 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.91□□□□□ -2.1
NCK1P16333 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.91□□□□□ -2.1
NCK1P16333 CALM2P2-201ENST00000428512 440 ntBASIC1.91□□□□□ -2.1
NCK1P16333 AL365400.1-201ENST00000431854 640 ntBASIC1.91□□□□□ -2.1
NCK1P16333 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.91□□□□□ -2.1
NCK1P16333 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.91□□□□□ -2.1
NCK1P16333 RN7SL429P-201ENST00000479090 223 ntBASIC1.91□□□□□ -2.1
NCK1P16333 RN7SL489P-201ENST00000486185 223 ntBASIC1.91□□□□□ -2.1
NCK1P16333 RN7SL327P-201ENST00000488659 223 ntBASIC1.91□□□□□ -2.1
NCK1P16333 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.91□□□□□ -2.1
NCK1P16333 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.91□□□□□ -2.1
NCK1P16333 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.91□□□□□ -2.1
NCK1P16333 RNU6-586P-201ENST00000517265 104 ntBASIC1.91□□□□□ -2.1
NCK1P16333 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.91□□□□□ -2.1
NCK1P16333 AP003072.2-201ENST00000527756 676 ntBASIC1.91□□□□□ -2.1
NCK1P16333 AP001646.1-201ENST00000527936 915 ntBASIC1.91□□□□□ -2.1
NCK1P16333 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.91□□□□□ -2.1
NCK1P16333 AC026271.5-201ENST00000577873 130 ntBASIC1.91□□□□□ -2.1
NCK1P16333 HMGN1P30-201ENST00000589286 268 ntBASIC1.91□□□□□ -2.1
NCK1P16333 SNRPGP17-201ENST00000603780 214 ntBASIC1.91□□□□□ -2.1
NCK1P16333 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
NCK1P16333 AC013412.1-201ENST00000610687 192 ntBASIC1.91□□□□□ -2.1
NCK1P16333 RN7SL853P-201ENST00000617250 223 ntBASIC1.91□□□□□ -2.1
NCK1P16333 AC138649.3-201ENST00000622154 254 ntBASIC1.91□□□□□ -2.1
NCK1P16333 AC243829.7-201ENST00000633081 225 ntBASIC1.91□□□□□ -2.1
NCK1P16333 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
NCK1P16333 RNY1P12-201ENST00000364251 105 ntBASIC1.9□□□□□ -2.11
NCK1P16333 SNORA24.1-201ENST00000384401 135 ntBASIC1.9□□□□□ -2.11
NCK1P16333 RNU2-23P-201ENST00000410545 195 ntBASIC1.9□□□□□ -2.11
NCK1P16333 AC114491.1-201ENST00000416095 246 ntBASIC1.9□□□□□ -2.11
NCK1P16333 AC138623.1-201ENST00000418060 216 ntBASIC1.9□□□□□ -2.11
NCK1P16333 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.9□□□□□ -2.11
NCK1P16333 AL356583.2-201ENST00000426536 280 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms