Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC092451.1-201ENST00000480211 153 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 APOOP4-201ENST00000513530 597 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 RNU6-1143P-201ENST00000516125 104 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 RNU6-991P-201ENST00000516168 107 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 Y_RNA.708-201ENST00000516950 96 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 RN7SKP234-201ENST00000517173 224 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 RNU6-1231P-201ENST00000517185 103 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
FOXN1O15353 HIGD1AP1-201ENST00000550979 275 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.83□□□□□ -1.8
FOXN1O15353 MIR2682-201ENST00000580305 110 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 ZNF734P-201ENST00000419494 1534 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.83□□□□□ -1.8
FOXN1O15353 AC091812.1-201ENST00000432235 1948 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.83□□□□□ -1.8
FOXN1O15353 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FOXN1O15353 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
FOXN1O15353 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.82□□□□□ -1.8
FOXN1O15353 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.82□□□□□ -1.8
FOXN1O15353 MTND5P27-201ENST00000428871 1720 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
FOXN1O15353 Y_RNA.489-201ENST00000384410 101 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 Y_RNA.594-201ENST00000410373 140 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 RNA5SP107-201ENST00000411358 122 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 AL356968.1-201ENST00000416622 474 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 AL139132.1-201ENST00000431587 344 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 RPL36AP6-201ENST00000435770 321 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 HIGD1AP11-201ENST00000438361 280 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 AL135938.1-201ENST00000443141 297 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 snoU13.23-201ENST00000458863 104 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 snoU13.15-201ENST00000459407 104 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.82□□□□□ -1.8
FOXN1O15353 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.82□□□□□ -1.8
FOXN1O15353 RBBP4P6-201ENST00000508098 202 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 AC007566.2-201ENST00000603642 413 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 AC018462.2-201ENST00000605375 395 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 AC012443.1-201ENST00000605605 231 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 AC138627.2-201ENST00000624202 601 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 MIR4496-201ENST00000635896 61 ntBASIC3.82□□□□□ -1.8
FOXN1O15353 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.82□□□□□ -1.8
FOXN1O15353 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
FOXN1O15353 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXN1O15353 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
FOXN1O15353 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.81□□□□□ -1.8
FOXN1O15353 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
FOXN1O15353 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXN1O15353 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXN1O15353 Y_RNA.396-201ENST00000383949 103 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 RNU6-209P-201ENST00000384118 107 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 Y_RNA.447-201ENST00000384184 113 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
FOXN1O15353 RNU2-15P-201ENST00000410692 191 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 RPL23AP82-202ENST00000427528 469 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.81□□□□□ -1.8
FOXN1O15353 MTCO3P45-201ENST00000443036 613 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXN1O15353 CENPBD1P1-201ENST00000464061 469 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 DYNLL1P5-201ENST00000467158 270 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 RPS29P26-201ENST00000477483 171 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 AC068781.1-201ENST00000488231 618 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 RPL22P13-201ENST00000493291 347 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.81□□□□□ -1.8
FOXN1O15353 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXN1O15353 AC116655.1-201ENST00000508324 901 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.81□□□□□ -1.8
FOXN1O15353 AC108078.2-201ENST00000510750 236 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 AC008413.1-201ENST00000511864 177 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 GNAI2P1-201ENST00000541815 315 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 AC092470.1-201ENST00000546187 132 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 MIR4293-201ENST00000584305 78 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 MIR5692C1-201ENST00000585309 91 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.81□□□□□ -1.8
FOXN1O15353 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
FOXN1O15353 AL158827.2-201ENST00000602494 330 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 AC092447.9-201ENST00000603395 144 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXN1O15353 AL691447.3-201ENST00000635020 330 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 MIR6715B-201ENST00000637172 77 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXN1O15353 MFSD8-233ENST00000641482 4860 ntBASIC3.81□□□□□ -1.8
FOXN1O15353 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXN1O15353 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXN1O15353 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
FOXN1O15353 RNU6-960P-201ENST00000364056 120 ntBASIC3.8□□□□□ -1.8
FOXN1O15353 Y_RNA.428-201ENST00000384078 102 ntBASIC3.8□□□□□ -1.8
FOXN1O15353 Y_RNA.493-201ENST00000384422 102 ntBASIC3.8□□□□□ -1.8
FOXN1O15353 SNORA70E-201ENST00000384492 135 ntBASIC3.8□□□□□ -1.8
FOXN1O15353 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FOXN1O15353 RNA5SP31-201ENST00000411144 127 ntBASIC3.8□□□□□ -1.8
FOXN1O15353 AC126124.2-201ENST00000413542 321 ntBASIC3.8□□□□□ -1.8
FOXN1O15353 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXN1O15353 ARL5AP4-201ENST00000430731 512 ntBASIC3.8□□□□□ -1.8
FOXN1O15353 EZH2P1-201ENST00000431167 291 ntBASIC3.8□□□□□ -1.8
FOXN1O15353 AC105272.1-201ENST00000438604 198 ntBASIC3.8□□□□□ -1.8
FOXN1O15353 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXN1O15353 IFNA11P-201ENST00000446352 526 ntBASIC3.8□□□□□ -1.8
FOXN1O15353 COX7A2P2-201ENST00000505291 250 ntBASIC3.8□□□□□ -1.8
FOXN1O15353 AC022493.2-201ENST00000506122 481 ntBASIC3.8□□□□□ -1.8
FOXN1O15353 RNU6-1092P-201ENST00000516955 87 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms