Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 OR4R1P-201ENST00000529879 463 ntBASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 UCA1.1-201ENST00000620952 75 ntBASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 SEPT14P19-203ENST00000633205 211 ntBASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 U6.99-201ENST00000637524 83 ntBASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 Z82195.2-201ENST00000612348 18351 ntBASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NEDD8-MDP1E9PL57 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 Y_RNA.41-201ENST00000362646 102 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6-623P-201ENST00000363143 105 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 Y_RNA.296-201ENST00000364930 108 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6-395P-201ENST00000365662 106 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6-1029P-201ENST00000384109 107 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6-1042P-201ENST00000384204 107 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 SNORD116-4-201ENST00000384733 96 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR578-201ENST00000384828 96 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR518D-201ENST00000385014 87 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR767-201ENST00000390228 109 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6-550P-201ENST00000391057 101 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AC068050.1-201ENST00000394891 380 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 RN7SKP223-201ENST00000410582 62 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 MTCO3P41-201ENST00000414801 328 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 OR6C66P-201ENST00000414917 930 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AL356320.1-201ENST00000429616 163 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AC073464.1-201ENST00000429823 534 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AC000111.3-201ENST00000433478 193 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AL121890.1-201ENST00000435457 205 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 CR769767.1-201ENST00000436337 346 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 MTCO2P7-201ENST00000446518 666 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AL360271.2-201ENST00000447710 161 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AL118520.1-201ENST00000450770 291 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AC073901.1-201ENST00000462471 408 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AC133134.1-201ENST00000466800 359 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 RPL23AP49-201ENST00000492925 468 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 RPS29P21-201ENST00000496272 170 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 YWHAEP4-201ENST00000505390 198 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AC112206.3-201ENST00000514578 389 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AP005435.4-201ENST00000529514 284 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AL136363.2-201ENST00000604173 851 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AL670379.4-201ENST00000605279 254 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AC007684.1-201ENST00000609671 477 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR6715A-201ENST00000615929 79 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR6134-201ENST00000617606 109 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 AC005609.4-201ENST00000625071 447 ntBASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NEDD8-MDP1E9PL57 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AC010889.1-201ENST00000566193 2666 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 SNORD3E-201ENST00000362899 217 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AL513477.1-202ENST00000417061 214 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AL596276.1-201ENST00000434465 418 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AC002486.1-201ENST00000435098 391 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 MTND1P18-201ENST00000448191 573 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 RPS15AP27-201ENST00000449183 343 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AC003071.1-201ENST00000451219 789 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AL356010.1-201ENST00000456364 102 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 TPTE2P5-203ENST00000458118 728 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 RPS29P15-201ENST00000458329 171 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AC006512.1-201ENST00000468816 291 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 EIF4EP3-201ENST00000498782 656 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 FAM92A1P2-202ENST00000504766 877 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 MTCO3P9-201ENST00000506989 781 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AC010493.1-201ENST00000513479 292 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 RANP3-201ENST00000530970 276 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 GLYCAM1-201ENST00000546596 285 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AC006199.1-201ENST00000548728 219 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 LINC00933-203ENST00000559812 219 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AC009163.5-201ENST00000575421 637 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AC005498.1-201ENST00000592125 465 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms