Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 RNU6-741P-201ENST00000383889 107 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 RNU6-831P-201ENST00000384548 107 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 MIR325-201ENST00000385260 98 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 RNA5SP219-201ENST00000390940 113 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 U3.26-201ENST00000391236 204 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 POLHP1-201ENST00000411806 470 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 BX682237.1-201ENST00000415016 335 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 UBE2D3P2-201ENST00000424409 445 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AL591704.1-201ENST00000432574 275 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 NDUFB4P6-201ENST00000436819 366 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.97□□□□□ -1.93
SIX4Q9UIU6 RPL37P6-201ENST00000460682 294 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 DYNLL1P5-201ENST00000467158 270 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 TRBV1-201ENST00000476502 284 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.97□□□□□ -1.93
SIX4Q9UIU6 FAM206BP-201ENST00000510179 541 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.97□□□□□ -1.93
SIX4Q9UIU6 RNU1-103P-201ENST00000516502 125 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AP001804.3-201ENST00000525146 880 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AC087241.2-201ENST00000535801 324 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
SIX4Q9UIU6 MIR4742-201ENST00000581069 85 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SIX4Q9UIU6 ZNF861P-201ENST00000588126 639 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 ELOCP29-201ENST00000588193 334 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AC005261.5-201ENST00000596280 355 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AL117336.2-201ENST00000602435 335 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AC005046.1-201ENST00000608515 625 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AC107294.1-201ENST00000609524 467 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AC093913.1-201ENST00000614178 329 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AL359314.1-201ENST00000616913 261 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AC006111.3-201ENST00000622137 383 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SIX4Q9UIU6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
SIX4Q9UIU6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SIX4Q9UIU6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.97□□□□□ -1.93
SIX4Q9UIU6 AC093908.1-201ENST00000623125 8092 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SIX4Q9UIU6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SIX4Q9UIU6 Y_RNA.100-201ENST00000363141 102 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 Y_RNA.142-201ENST00000363491 102 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 Y_RNA.263-201ENST00000364659 114 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 RNU6-7-201ENST00000364784 107 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 RNU6-8-201ENST00000365467 107 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 RNU6-393P-201ENST00000384475 107 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 MIR578-201ENST00000384828 96 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 AL360182.1-201ENST00000397433 468 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 AL356432.1-201ENST00000405809 419 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 ARL5AP1-201ENST00000418991 388 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 MTND3P23-201ENST00000431980 347 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 AC112220.1-201ENST00000434628 355 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.96□□□□□ -1.94
SIX4Q9UIU6 AC009237.8-201ENST00000445492 379 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 MRPL50P4-201ENST00000446432 475 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 MTND1P11-201ENST00000456661 876 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 AC090525.1-201ENST00000479116 478 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 AL160314.1-201ENST00000490836 438 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 RNU2-69P-201ENST00000516061 100 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.96□□□□□ -1.94
SIX4Q9UIU6 VN1R80P-201ENST00000597126 338 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.96□□□□□ -1.94
SIX4Q9UIU6 AC002076.2-201ENST00000617362 122 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.96□□□□□ -1.94
SIX4Q9UIU6 AC099654.5-201ENST00000636479 350 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 AC090740.1-201ENST00000623193 2262 ntBASIC2.96□□□□□ -1.94
SIX4Q9UIU6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
SIX4Q9UIU6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SIX4Q9UIU6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 Y_RNA.166-201ENST00000363730 102 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 RNU6-82P-201ENST00000363970 107 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 Y_RNA.245-201ENST00000364493 95 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 RNU6-1303P-201ENST00000364841 107 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 RNU6-1197P-201ENST00000391183 107 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 RPS4XP7-201ENST00000406274 780 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 RNA5SP21-201ENST00000410917 96 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AL590383.1-201ENST00000428602 75 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AC092573.2-201ENST00000434546 243 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 IFNA20P-201ENST00000436840 528 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AL360271.2-201ENST00000447710 161 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AC108938.1-201ENST00000451204 136 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 FABP5P15-201ENST00000453566 214 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 TBCAP3-201ENST00000512475 312 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 RNA5SP356-201ENST00000515972 94 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 RNU6-189P-201ENST00000516120 101 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 RNU7-30P-201ENST00000516835 62 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 RNA5SP290-201ENST00000517133 127 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms