Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RNU6-989P-201ENST00000362756 107 ntBASIC0.36□□□□□ -2.35
SCN11AQ9UI33 RNU2-36P-201ENST00000410361 191 ntBASIC0.36□□□□□ -2.35
SCN11AQ9UI33 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.36□□□□□ -2.35
SCN11AQ9UI33 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SCN11AQ9UI33 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.36□□□□□ -2.35
SCN11AQ9UI33 SNORA4.4-201ENST00000515921 135 ntBASIC0.36□□□□□ -2.35
SCN11AQ9UI33 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.36□□□□□ -2.35
SCN11AQ9UI33 ADAM3B-201ENST00000569937 840 ntBASIC0.36□□□□□ -2.35
SCN11AQ9UI33 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.36□□□□□ -2.35
SCN11AQ9UI33 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.36□□□□□ -2.35
SCN11AQ9UI33 MIR6130-201ENST00000619419 109 ntBASIC0.36□□□□□ -2.35
SCN11AQ9UI33 AL049641.1-201ENST00000441055 1948 ntBASIC0.35□□□□□ -2.35
SCN11AQ9UI33 MIR29C-201ENST00000385231 88 ntBASIC0.35□□□□□ -2.35
SCN11AQ9UI33 AL049734.2-201ENST00000441066 616 ntBASIC0.35□□□□□ -2.35
SCN11AQ9UI33 AL049714.1-201ENST00000466686 347 ntBASIC0.35□□□□□ -2.35
SCN11AQ9UI33 AC108729.1-201ENST00000487812 947 ntBASIC0.35□□□□□ -2.35
SCN11AQ9UI33 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.35□□□□□ -2.35
SCN11AQ9UI33 MIR5190-201ENST00000581537 80 ntBASIC0.35□□□□□ -2.35
SCN11AQ9UI33 VN1R82P-201ENST00000601481 356 ntBASIC0.35□□□□□ -2.35
SCN11AQ9UI33 AC134026.1-201ENST00000623249 2239 ntBASIC0.35□□□□□ -2.35
SCN11AQ9UI33 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.35□□□□□ -2.35
SCN11AQ9UI33 AC138393.1-203ENST00000327086 343 ntBASIC0.34□□□□□ -2.35
SCN11AQ9UI33 SNORA4.1-201ENST00000364263 144 ntBASIC0.34□□□□□ -2.35
SCN11AQ9UI33 Y_RNA.476-201ENST00000384347 108 ntBASIC0.34□□□□□ -2.35
SCN11AQ9UI33 MTATP6P31-201ENST00000406985 692 ntBASIC0.34□□□□□ -2.35
SCN11AQ9UI33 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.34□□□□□ -2.35
SCN11AQ9UI33 BTF3P8-201ENST00000414577 526 ntBASIC0.34□□□□□ -2.35
SCN11AQ9UI33 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.34□□□□□ -2.35
SCN11AQ9UI33 AL163195.1-201ENST00000496941 348 ntBASIC0.34□□□□□ -2.35
SCN11AQ9UI33 SNORA31.6-201ENST00000516241 130 ntBASIC0.34□□□□□ -2.35
SCN11AQ9UI33 AC012414.6-201ENST00000568241 401 ntBASIC0.34□□□□□ -2.35
SCN11AQ9UI33 SNRPGP17-201ENST00000603780 214 ntBASIC0.34□□□□□ -2.35
SCN11AQ9UI33 MIR32-201ENST00000384965 70 ntBASIC0.34□□□□□ -2.36
SCN11AQ9UI33 RPS3AP37-201ENST00000419176 745 ntBASIC0.34□□□□□ -2.36
SCN11AQ9UI33 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.34□□□□□ -2.36
SCN11AQ9UI33 AC023512.1-201ENST00000444513 499 ntBASIC0.34□□□□□ -2.36
SCN11AQ9UI33 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.34□□□□□ -2.36
SCN11AQ9UI33 FCF1P6-201ENST00000456841 595 ntBASIC0.34□□□□□ -2.36
SCN11AQ9UI33 TRBVA-201ENST00000498804 316 ntBASIC0.34□□□□□ -2.36
SCN11AQ9UI33 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.34□□□□□ -2.36
SCN11AQ9UI33 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.34□□□□□ -2.36
SCN11AQ9UI33 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.34□□□□□ -2.36
SCN11AQ9UI33 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.34□□□□□ -2.36
SCN11AQ9UI33 AC012669.1-201ENST00000603209 283 ntBASIC0.34□□□□□ -2.36
SCN11AQ9UI33 AC024060.1-201ENST00000607052 494 ntBASIC0.34□□□□□ -2.36
SCN11AQ9UI33 AC091965.5-201ENST00000624785 342 ntBASIC0.34□□□□□ -2.36
SCN11AQ9UI33 RNU6-339P-201ENST00000384310 107 ntBASIC0.33□□□□□ -2.36
SCN11AQ9UI33 MIR329-1-201ENST00000385028 80 ntBASIC0.33□□□□□ -2.36
SCN11AQ9UI33 MIR1290-201ENST00000408735 78 ntBASIC0.33□□□□□ -2.36
SCN11AQ9UI33 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.33□□□□□ -2.36
SCN11AQ9UI33 AC005741.1-201ENST00000511094 432 ntBASIC0.33□□□□□ -2.36
SCN11AQ9UI33 AC006199.1-201ENST00000548728 219 ntBASIC0.33□□□□□ -2.36
SCN11AQ9UI33 AC105224.1-201ENST00000587055 421 ntBASIC0.33□□□□□ -2.36
SCN11AQ9UI33 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.33□□□□□ -2.36
SCN11AQ9UI33 AC080013.4-201ENST00000607624 649 ntBASIC0.33□□□□□ -2.36
SCN11AQ9UI33 AC013468.1-201ENST00000608680 598 ntBASIC0.33□□□□□ -2.36
SCN11AQ9UI33 AC009233.1-201ENST00000616477 371 ntBASIC0.33□□□□□ -2.36
SCN11AQ9UI33 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
SCN11AQ9UI33 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
SCN11AQ9UI33 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.32□□□□□ -2.36
SCN11AQ9UI33 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.32□□□□□ -2.36
SCN11AQ9UI33 SNORA25-201ENST00000384384 134 ntBASIC0.32□□□□□ -2.36
SCN11AQ9UI33 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.32□□□□□ -2.36
SCN11AQ9UI33 RPL23AP95-201ENST00000426806 265 ntBASIC0.32□□□□□ -2.36
SCN11AQ9UI33 MTCO1P3-201ENST00000429327 192 ntBASIC0.32□□□□□ -2.36
SCN11AQ9UI33 MED14P1-201ENST00000430517 648 ntBASIC0.32□□□□□ -2.36
SCN11AQ9UI33 AC132479.1-201ENST00000449160 144 ntBASIC0.32□□□□□ -2.36
SCN11AQ9UI33 CYP2C59P-201ENST00000457790 269 ntBASIC0.32□□□□□ -2.36
SCN11AQ9UI33 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.32□□□□□ -2.36
SCN11AQ9UI33 AC010738.1-201ENST00000604970 987 ntBASIC0.32□□□□□ -2.36
SCN11AQ9UI33 AL022345.1-201ENST00000607292 135 ntBASIC0.32□□□□□ -2.36
SCN11AQ9UI33 AC005021.1-201ENST00000608730 355 ntBASIC0.32□□□□□ -2.36
SCN11AQ9UI33 AC110491.1-201ENST00000562191 2010 ntBASIC0.32□□□□□ -2.36
SCN11AQ9UI33 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.32□□□□□ -2.36
SCN11AQ9UI33 OR5AK1P-201ENST00000524837 922 ntBASIC0.32□□□□□ -2.36
SCN11AQ9UI33 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.32□□□□□ -2.36
SCN11AQ9UI33 AC023050.2-201ENST00000544968 387 ntBASIC0.32□□□□□ -2.36
SCN11AQ9UI33 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.32□□□□□ -2.36
SCN11AQ9UI33 AC105036.1-201ENST00000566222 271 ntBASIC0.32□□□□□ -2.36
SCN11AQ9UI33 FAM157A-202ENST00000615155 405 ntBASIC0.32□□□□□ -2.36
SCN11AQ9UI33 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.32□□□□□ -2.36
SCN11AQ9UI33 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.31□□□□□ -2.36
SCN11AQ9UI33 SNORD33-201ENST00000362761 85 ntBASIC0.31□□□□□ -2.36
SCN11AQ9UI33 RNU6-217P-201ENST00000384164 104 ntBASIC0.31□□□□□ -2.36
SCN11AQ9UI33 MIR1267-201ENST00000408723 78 ntBASIC0.31□□□□□ -2.36
SCN11AQ9UI33 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.31□□□□□ -2.36
SCN11AQ9UI33 AC096649.2-201ENST00000416186 393 ntBASIC0.31□□□□□ -2.36
SCN11AQ9UI33 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
SCN11AQ9UI33 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.31□□□□□ -2.36
SCN11AQ9UI33 RPS15AP5-201ENST00000436276 388 ntBASIC0.31□□□□□ -2.36
SCN11AQ9UI33 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.31□□□□□ -2.36
SCN11AQ9UI33 AC013267.1-201ENST00000458227 267 ntBASIC0.31□□□□□ -2.36
SCN11AQ9UI33 BOLA3P3-201ENST00000505182 232 ntBASIC0.31□□□□□ -2.36
SCN11AQ9UI33 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.31□□□□□ -2.36
SCN11AQ9UI33 AC090116.1-201ENST00000615679 446 ntBASIC0.31□□□□□ -2.36
SCN11AQ9UI33 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.31□□□□□ -2.36
SCN11AQ9UI33 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.31□□□□□ -2.36
SCN11AQ9UI33 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
SCN11AQ9UI33 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.3□□□□□ -2.36
SCN11AQ9UI33 MIR95-201ENST00000385072 81 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms