Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AC000111.3-201ENST00000433478 193 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 CALM1P1-201ENST00000442082 433 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 USP9YP29-201ENST00000445112 563 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 RPL7P12-201ENST00000446719 750 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AC011753.1-201ENST00000451001 220 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AC027673.1-201ENST00000456245 405 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AC133134.1-201ENST00000466800 359 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 HMGB1P30-201ENST00000492455 606 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 ARL2BPP4-201ENST00000506854 471 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AC117522.2-201ENST00000510049 657 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AC114781.4-201ENST00000513707 639 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 RNU1-86P-201ENST00000516108 154 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 RNU1-107P-201ENST00000516617 154 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AP005902.1-201ENST00000521358 186 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AL133241.1-201ENST00000556832 487 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 MIR5692A1-201ENST00000580523 69 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 RPS15AP11-201ENST00000594193 385 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AC025811.1-201ENST00000604312 472 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AC009233.1-201ENST00000616477 371 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 RMST_4.1-201ENST00000616886 107 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AC099842.1-201ENST00000619919 596 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 Z69908.1-201ENST00000622603 247 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 SCARNA4-202ENST00000625402 129 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 U6.114-201ENST00000636407 96 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 MIR3529-201ENST00000637713 78 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 AC006020.1-201ENST00000420179 1854 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 MIR6073-201ENST00000352083 89 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-181P-201ENST00000363225 107 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 SNORA80A-201ENST00000363922 136 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 RNU1-52P-201ENST00000384190 164 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-348P-201ENST00000384386 107 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 RNY3P9-201ENST00000384727 106 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-550P-201ENST00000391057 101 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 RPL23AP45-201ENST00000476406 468 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 RPS27P27-201ENST00000498779 255 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 HMGB3P3-201ENST00000510526 400 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 RN7SKP24-201ENST00000515888 284 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 RNA5SP356-201ENST00000515972 94 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 Y_RNA.687-201ENST00000516558 91 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-445P-201ENST00000516949 107 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 CR383656.8-201ENST00000549046 145 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 AC074050.1-201ENST00000563247 211 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 AC136619.2-201ENST00000563361 631 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 Z84480.1-201ENST00000605131 311 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 AC096772.1-201ENST00000609146 564 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 AC072046.2-201ENST00000618366 268 ntBASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ZCCHC3Q9NUD5 ELL2P3-201ENST00000457883 1602 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 HAUS6P2-201ENST00000433254 2404 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 RBBP8P1-201ENST00000449447 1844 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 AC062016.1-201ENST00000355719 319 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 SNORA25.6-201ENST00000364121 118 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-116P-201ENST00000384042 109 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 RNA5SP184-201ENST00000411071 108 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 AL162395.1-201ENST00000457882 422 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 AC022364.2-201ENST00000457963 554 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 RNU7-182P-201ENST00000459009 62 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 KLF3P2-201ENST00000465138 268 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 AC117503.1-201ENST00000472241 394 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 AF213884.2-201ENST00000510417 903 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 RNA5SP320-201ENST00000516263 124 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-430P-201ENST00000517078 107 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 MTCYBP33-201ENST00000575007 1130 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms