Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 RNU6-3P-201ENST00000384314 107 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 RNU6-16P-201ENST00000384385 107 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 RNU6-15P-201ENST00000384534 107 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 RNU6-2-201ENST00000384627 107 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 RNU6-29P-201ENST00000384637 107 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 RNU6-9-201ENST00000384776 107 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 RNU6-33P-201ENST00000384793 107 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 RNA5SP274-201ENST00000410484 108 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 POLHP1-201ENST00000411806 470 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 HMGN2P35-201ENST00000412164 270 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 AL513477.1-202ENST00000417061 214 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 AC097713.2-201ENST00000430199 356 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 AL513043.1-201ENST00000439124 535 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 AP001324.2-201ENST00000461163 319 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 AP004217.1-201ENST00000480579 346 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 AC092989.1-201ENST00000481235 277 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 AC026403.1-201ENST00000518938 295 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 AC024153.1-201ENST00000603103 365 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 AL670379.10-201ENST00000604330 253 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 AC019159.1-201ENST00000605094 187 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 AL670379.9-201ENST00000605428 253 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 RNU6-6P-201ENST00000606623 107 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 AC092807.2-201ENST00000609367 243 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 AC138915.1-201ENST00000565427 1685 ntBASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.65□□□□□ -1.99
CHMP1AQ9HD42 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 RNU6-858P-201ENST00000362436 107 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 SNORD56.5-201ENST00000364281 72 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 MIR147B-201ENST00000390185 80 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AL133475.1-201ENST00000404414 305 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 RPLP0P7-201ENST00000416050 667 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 ZNF885P-201ENST00000420174 1098 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 RPS15AP7-201ENST00000439294 405 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 RPS12P18-201ENST00000442381 270 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 RNU6-1208P-201ENST00000459588 107 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AC117503.1-201ENST00000472241 394 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 MED28P2-201ENST00000475771 317 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 RPL7P43-201ENST00000478876 753 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 RPS29P25-201ENST00000481709 171 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 RNU6-189P-201ENST00000516120 101 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 CR383656.8-201ENST00000549046 145 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AC009163.5-201ENST00000575421 637 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AC138761.3-201ENST00000579993 334 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 MIR3922-201ENST00000585192 84 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AC006130.2-201ENST00000586202 326 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AC008121.1-201ENST00000603244 268 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AC092747.3-201ENST00000603769 301 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 APOOP1-201ENST00000604695 592 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 AC103705.1-201ENST00000619013 241 ntBASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHMP1AQ9HD42 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 RNU6-78P-201ENST00000362897 107 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 RNU6-1083P-201ENST00000384022 107 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 Y_RNA.453-201ENST00000384223 109 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 FO393413.1-201ENST00000402892 195 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 SNRPEP10-201ENST00000420249 274 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 TOMM20P4-201ENST00000427861 435 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 SRIP2-201ENST00000428470 166 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 ERLEC1P1-201ENST00000433806 578 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 HMGB1P31-201ENST00000437242 427 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 RPL23AP45-201ENST00000476406 468 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 RPL23AP70-201ENST00000483361 460 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 Y_RNA.654-201ENST00000497848 106 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 AC110794.1-201ENST00000505816 425 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 HIGD1AP13-201ENST00000509878 289 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 SNORA14.1-201ENST00000516113 141 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 SNORA31.15-201ENST00000516771 132 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 MTND4LP26-201ENST00000518144 282 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 AC023050.3-201ENST00000541142 333 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 AC090616.3-201ENST00000582184 217 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 MIR3941-201ENST00000582572 103 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms