Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 MIR4419B-201ENST00000577260 68 ntBASIC1.64□□□□□ -2.15
SLIRPQ9GZT3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.64□□□□□ -2.15
SLIRPQ9GZT3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.64□□□□□ -2.15
SLIRPQ9GZT3 AL138889.2-201ENST00000603883 242 ntBASIC1.64□□□□□ -2.15
SLIRPQ9GZT3 AC022202.1-201ENST00000613515 211 ntBASIC1.64□□□□□ -2.15
SLIRPQ9GZT3 YWHAEP7-203ENST00000622054 312 ntBASIC1.64□□□□□ -2.15
SLIRPQ9GZT3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.64□□□□□ -2.15
SLIRPQ9GZT3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SLIRPQ9GZT3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 RNU6-858P-201ENST00000362436 107 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 SNORD3E-201ENST00000362899 217 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 RNU1-23P-201ENST00000363361 144 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 RNA5SP363-201ENST00000365072 115 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 RNU6-72P-201ENST00000384285 79 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 RNU2-20P-201ENST00000410425 191 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AL031779.1-201ENST00000415663 330 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 USP9YP15-201ENST00000442391 422 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 PSPHP1-201ENST00000450062 261 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AC108938.1-201ENST00000451204 136 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AP000797.1-201ENST00000478870 387 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 HMGB3P17-201ENST00000504195 649 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AC112206.3-201ENST00000514578 389 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 SNORA4.4-201ENST00000515921 135 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 RNU4-29P-201ENST00000515943 174 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 RNA5SP356-201ENST00000515972 94 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AC034114.1-201ENST00000520293 285 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AC107953.1-201ENST00000522216 297 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AP004607.1-201ENST00000524456 203 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 NDUFA5P6-201ENST00000542110 379 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 DEFB122-202ENST00000569013 197 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 BNIP3P33-201ENST00000598912 569 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 RPL30P11-203ENST00000598995 310 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AC073410.2-201ENST00000603240 332 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AC021646.1-201ENST00000605469 484 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AC098614.4-201ENST00000607601 462 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AC027449.1-201ENST00000608890 407 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 MIR7844-201ENST00000616161 122 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AC009878.1-201ENST00000621819 340 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AC068787.1-201ENST00000623908 691 ntBASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.63□□□□□ -2.15
SLIRPQ9GZT3 RNU6-1159P-201ENST00000362933 107 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 SNORD14B-201ENST00000364533 90 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 RNU6-39P-201ENST00000384344 107 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 MIR491-201ENST00000384877 84 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 AC114491.1-201ENST00000416095 246 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 RPL31P63-201ENST00000422565 375 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 AC119618.1-201ENST00000434191 222 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 AL109933.2-201ENST00000452651 260 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 KATNBL1P6-201ENST00000453433 915 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 HMGB1P30-201ENST00000492455 606 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 ADI1P3-201ENST00000549509 470 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 IMMP1LP2-201ENST00000552954 492 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 LARP7P3-201ENST00000579888 337 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 AL031274.2-201ENST00000599419 203 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 BNIP3P30-201ENST00000601184 574 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 AC093788.1-201ENST00000609356 927 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 AC012409.4-201ENST00000612923 249 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 AC006386.2-201ENST00000624491 75 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 AC012005.1-201ENST00000624575 75 ntBASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SLIRPQ9GZT3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 RNU6-622P-201ENST00000384272 103 ntBASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 MIR186-201ENST00000384988 86 ntBASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 MRPL42P2-201ENST00000403169 426 ntBASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 MTCYBP36-201ENST00000404146 440 ntBASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 AC138623.1-201ENST00000418060 216 ntBASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 PGBD4P6-201ENST00000421501 610 ntBASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 AC013410.2-201ENST00000422627 201 ntBASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 AC007283.2-201ENST00000424739 197 ntBASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 AL589872.1-201ENST00000426602 288 ntBASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 MTCO3P5-201ENST00000433620 714 ntBASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 RNA5SP233-201ENST00000459153 113 ntBASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 snoU109.2-201ENST00000459316 135 ntBASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 AP001025.1-201ENST00000486139 332 ntBASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.61□□□□□ -2.15
SLIRPQ9GZT3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms