Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SNORD48-201ENST00000364953 64 ntBASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 RNU5E-6P-201ENST00000365574 115 ntBASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 SMIM11P1-201ENST00000369586 178 ntBASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 RNU6-809P-201ENST00000384461 107 ntBASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 HMGN2P19-201ENST00000425149 265 ntBASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 MTND2P14-201ENST00000482139 351 ntBASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 ANP32BP3-201ENST00000559213 706 ntBASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 MIR8070-201ENST00000616510 88 ntBASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 AC006338.1-201ENST00000618453 749 ntBASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 Z99571.1-201ENST00000636677 394 ntBASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 MTND5P42-201ENST00000637720 498 ntBASIC2.18□□□□□ -2.06
RPAP1Q9BWH6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 Y_RNA.508-201ENST00000384502 114 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 FCF1P10-201ENST00000407590 479 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 RNU6-920P-201ENST00000410926 92 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 RNA5SP270-201ENST00000411361 118 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 BTF3P4-201ENST00000418852 495 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 PTGES3P4-201ENST00000426243 356 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 AC093106.2-201ENST00000428212 385 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 AC004383.1-201ENST00000438135 289 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 GPM6BP3-201ENST00000442797 145 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 AC118469.1-201ENST00000442943 488 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 PSPHP1-201ENST00000450062 261 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 RNU2-10P-201ENST00000516375 211 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 RNU6-678P-201ENST00000516832 109 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 MTND4LP18-201ENST00000526864 291 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 AC084851.1-201ENST00000529105 249 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 AL359821.1-201ENST00000605519 182 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 AC092192.1-201ENST00000633154 1018 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 AL512643.1-201ENST00000635735 524 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 AC007671.2-201ENST00000637344 619 ntBASIC2.17□□□□□ -2.06
RPAP1Q9BWH6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 AL359854.1-201ENST00000614203 1594 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 SNORA16.1-201ENST00000364597 132 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 Z98749.2-208ENST00000381646 500 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 U8.10-201ENST00000384260 133 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 MIR147B-201ENST00000390185 80 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 OR51A5P-201ENST00000415429 942 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 AC006366.1-201ENST00000422002 759 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 RPL30P4-201ENST00000429309 333 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 MTCYBP39-201ENST00000437562 491 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 USP9YP15-201ENST00000442391 422 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 AC092001.1-201ENST00000453012 261 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 AC108078.2-201ENST00000510750 236 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 SNORA25.15-201ENST00000516487 89 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 RNU6-1092P-201ENST00000516955 87 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 AC009902.1-201ENST00000519351 183 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 AC022616.6-201ENST00000520479 119 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 LINC00933-203ENST00000559812 219 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 AC091489.2-201ENST00000566263 604 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 MIR4782-201ENST00000577987 79 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 AC008751.2-201ENST00000597885 980 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 AC069294.1-201ENST00000608397 350 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 AC005332.10-201ENST00000612725 619 ntBASIC2.16□□□□□ -2.06
RPAP1Q9BWH6 RNU6-661P-201ENST00000362409 107 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 RNU6-960P-201ENST00000364056 120 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 Y_RNA.796-201ENST00000364268 102 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 Y_RNA.799-201ENST00000364992 102 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 SNORA4.3-201ENST00000365564 137 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 MIR301A-201ENST00000385261 86 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 SNORA67.5-201ENST00000391036 107 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 U6atac.2-201ENST00000408644 118 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 AC093899.1-201ENST00000457984 376 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 AC080013.2-201ENST00000460866 323 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 AP001324.2-201ENST00000461163 319 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 RNU6-415P-201ENST00000516252 97 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 RNU6-572P-201ENST00000516724 80 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 ZNF519P3-201ENST00000557158 1032 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 PCMTD1P2-201ENST00000565017 355 ntBASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.15□□□□□ -2.07
RPAP1Q9BWH6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms