Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 MIR6130-201ENST00000619419 109 ntBASIC0.58□□□□□ -2.32
NUP188Q5SRE5 AC091965.5-201ENST00000624785 342 ntBASIC0.58□□□□□ -2.32
NUP188Q5SRE5 ZNF680P1-201ENST00000436625 1469 ntBASIC0.58□□□□□ -2.32
NUP188Q5SRE5 HMGB1P17-201ENST00000403495 628 ntBASIC0.57□□□□□ -2.32
NUP188Q5SRE5 UBE2V2P3-201ENST00000433562 437 ntBASIC0.57□□□□□ -2.32
NUP188Q5SRE5 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.57□□□□□ -2.32
NUP188Q5SRE5 RPL30P7-201ENST00000479312 323 ntBASIC0.57□□□□□ -2.32
NUP188Q5SRE5 LARP1BP2-201ENST00000486594 519 ntBASIC0.57□□□□□ -2.32
NUP188Q5SRE5 BOLA3P3-201ENST00000505182 232 ntBASIC0.57□□□□□ -2.32
NUP188Q5SRE5 SNORA4.4-201ENST00000515921 135 ntBASIC0.57□□□□□ -2.32
NUP188Q5SRE5 AC124293.1-201ENST00000530034 493 ntBASIC0.57□□□□□ -2.32
NUP188Q5SRE5 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.57□□□□□ -2.32
NUP188Q5SRE5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.57□□□□□ -2.32
NUP188Q5SRE5 SNRPGP17-201ENST00000603780 214 ntBASIC0.57□□□□□ -2.32
NUP188Q5SRE5 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.57□□□□□ -2.32
NUP188Q5SRE5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
NUP188Q5SRE5 AL391516.1-201ENST00000554380 2449 ntBASIC0.56□□□□□ -2.32
NUP188Q5SRE5 RNU5E-1-201ENST00000362477 120 ntBASIC0.56□□□□□ -2.32
NUP188Q5SRE5 RNU6-271P-201ENST00000363858 105 ntBASIC0.56□□□□□ -2.32
NUP188Q5SRE5 RNU6-140P-201ENST00000384566 108 ntBASIC0.56□□□□□ -2.32
NUP188Q5SRE5 AC083875.1-201ENST00000419509 405 ntBASIC0.56□□□□□ -2.32
NUP188Q5SRE5 RAB11AP1-201ENST00000442978 646 ntBASIC0.56□□□□□ -2.32
NUP188Q5SRE5 AC134050.1-201ENST00000495088 933 ntBASIC0.56□□□□□ -2.32
NUP188Q5SRE5 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
NUP188Q5SRE5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.56□□□□□ -2.32
NUP188Q5SRE5 MIR4802-201ENST00000581881 80 ntBASIC0.56□□□□□ -2.32
NUP188Q5SRE5 AL589743.7-201ENST00000612637 233 ntBASIC0.56□□□□□ -2.32
NUP188Q5SRE5 RNU6-748P-201ENST00000384648 107 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 MRPL35P1-201ENST00000404272 572 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 AL355615.1-201ENST00000406187 641 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 NDUFB4P7-201ENST00000423198 363 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 USP9YP24-201ENST00000434374 697 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.55□□□□□ -2.32
NUP188Q5SRE5 AC092685.1-201ENST00000447960 1243 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 RPL22P13-201ENST00000493291 347 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.55□□□□□ -2.32
NUP188Q5SRE5 AC091435.1-201ENST00000505442 584 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 AC079140.2-201ENST00000506193 142 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 AC117525.1-201ENST00000515228 503 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 RNU6-1256P-201ENST00000516539 103 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 LINC00557-201ENST00000563184 1279 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.55□□□□□ -2.32
NUP188Q5SRE5 AC008751.2-201ENST00000597885 980 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 AL031176.1-201ENST00000604554 466 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 AP005212.4-201ENST00000614206 710 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 AC013470.4-201ENST00000619978 986 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 MIR8065-201ENST00000620577 100 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
NUP188Q5SRE5 MIR649-201ENST00000384843 97 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.55□□□□□ -2.32
NUP188Q5SRE5 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.55□□□□□ -2.32
NUP188Q5SRE5 TRBVB-201ENST00000477100 408 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.55□□□□□ -2.32
NUP188Q5SRE5 SNORD116-28-201ENST00000516123 91 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 AL359212.1-201ENST00000556608 614 ntBASIC0.55□□□□□ -2.32
NUP188Q5SRE5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.55□□□□□ -2.32
NUP188Q5SRE5 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
NUP188Q5SRE5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.54□□□□□ -2.32
NUP188Q5SRE5 MIR29C-201ENST00000385231 88 ntBASIC0.54□□□□□ -2.32
NUP188Q5SRE5 AC010385.1-201ENST00000412374 256 ntBASIC0.54□□□□□ -2.32
NUP188Q5SRE5 NCOR1P3-201ENST00000420479 303 ntBASIC0.54□□□□□ -2.32
NUP188Q5SRE5 AL512844.2-201ENST00000433990 593 ntBASIC0.54□□□□□ -2.32
NUP188Q5SRE5 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.54□□□□□ -2.32
NUP188Q5SRE5 RPL26P6-201ENST00000440913 438 ntBASIC0.54□□□□□ -2.32
NUP188Q5SRE5 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.54□□□□□ -2.32
NUP188Q5SRE5 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
NUP188Q5SRE5 AC005832.3-201ENST00000537929 631 ntBASIC0.54□□□□□ -2.32
NUP188Q5SRE5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.54□□□□□ -2.32
NUP188Q5SRE5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.54□□□□□ -2.32
NUP188Q5SRE5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
NUP188Q5SRE5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
NUP188Q5SRE5 U6.107-201ENST00000637108 79 ntBASIC0.54□□□□□ -2.32
NUP188Q5SRE5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
NUP188Q5SRE5 RNU6-26P-201ENST00000383985 107 ntBASIC0.53□□□□□ -2.32
NUP188Q5SRE5 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.53□□□□□ -2.32
NUP188Q5SRE5 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.53□□□□□ -2.32
NUP188Q5SRE5 snoU13.9-201ENST00000458927 103 ntBASIC0.53□□□□□ -2.32
NUP188Q5SRE5 AP003122.4-201ENST00000530980 758 ntBASIC0.53□□□□□ -2.32
NUP188Q5SRE5 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.53□□□□□ -2.32
NUP188Q5SRE5 BNIP3P23-201ENST00000599655 511 ntBASIC0.53□□□□□ -2.32
NUP188Q5SRE5 SUMO2P14-201ENST00000604488 293 ntBASIC0.53□□□□□ -2.32
NUP188Q5SRE5 AL022345.1-201ENST00000607292 135 ntBASIC0.53□□□□□ -2.32
NUP188Q5SRE5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.53□□□□□ -2.32
NUP188Q5SRE5 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
NUP188Q5SRE5 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
NUP188Q5SRE5 RNU1-124P-201ENST00000363861 145 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 SNORD82-201ENST00000365530 70 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 RNU6-968P-201ENST00000384076 107 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 SNORA51.6-201ENST00000384151 125 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 SNORD51-201ENST00000384320 80 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
NUP188Q5SRE5 MTCO1P56-201ENST00000401674 224 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 RNU2-49P-201ENST00000410666 184 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 PIGFP2-201ENST00000421400 651 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 CYP2C59P-201ENST00000457790 269 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 RPL36AP48-201ENST00000485521 314 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 AC022483.1-201ENST00000514020 567 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.52□□□□□ -2.33
NUP188Q5SRE5 AC034114.1-201ENST00000520293 285 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms