Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RFX7Q2KHR2 Z75746.1-201ENST00000440243 2080 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 AL138713.1-201ENST00000624026 2130 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 Y_RNA.245-201ENST00000364493 95 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 RNU6-1078P-201ENST00000364522 103 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 SUGT1P1-201ENST00000379514 476 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 RNU1-39P-201ENST00000383897 165 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 RNU6-481P-201ENST00000384194 107 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 RNU6-1300P-201ENST00000391046 108 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 CCNG1P1-201ENST00000406783 885 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 AL451054.2-201ENST00000420896 202 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 AC097463.2-201ENST00000421074 142 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 C1DP1-201ENST00000426049 402 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 AC005534.2-201ENST00000431047 433 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 PTENP1-201ENST00000447117 1215 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 snoU13.8-201ENST00000458890 104 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 RPL36AP48-201ENST00000485521 314 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.04□□□□□ -2.24
RFX7Q2KHR2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.04□□□□□ -2.24
RFX7Q2KHR2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.04□□□□□ -2.24
RFX7Q2KHR2 MIR4714-201ENST00000580728 77 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.04□□□□□ -2.24
RFX7Q2KHR2 AP002906.1-201ENST00000603405 233 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 AC091152.3-201ENST00000604227 325 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.04□□□□□ -2.24
RFX7Q2KHR2 AC011939.3-201ENST00000613686 466 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 AC010133.1-201ENST00000615809 842 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 AC084824.4-201ENST00000620106 731 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.04□□□□□ -2.24
RFX7Q2KHR2 AC095038.3-201ENST00000634439 195 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.04□□□□□ -2.24
RFX7Q2KHR2 Y_RNA.25-201ENST00000362528 102 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 SNORD114-2-201ENST00000363953 78 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 RNU6-650P-201ENST00000365658 111 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 SNORA22-201ENST00000383907 134 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 SNORA22C-201ENST00000384614 134 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 BTF3L4P3-201ENST00000418879 476 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 AL139421.1-201ENST00000423010 169 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.03□□□□□ -2.24
RFX7Q2KHR2 SKA2P1-201ENST00000425592 390 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 PTGES3P4-201ENST00000426243 356 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 MTCYBP32-201ENST00000427945 1084 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.03□□□□□ -2.24
RFX7Q2KHR2 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.03□□□□□ -2.24
RFX7Q2KHR2 AL691517.1-201ENST00000440833 1235 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
RFX7Q2KHR2 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 SNORA25.11-201ENST00000515935 105 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 SNORA76.2-201ENST00000517095 137 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 RNU6-902P-201ENST00000517212 91 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.03□□□□□ -2.24
RFX7Q2KHR2 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.03□□□□□ -2.24
RFX7Q2KHR2 AL356432.3-201ENST00000568952 465 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 MIR4637-201ENST00000582405 84 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 KATNBL1P5-201ENST00000605015 517 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 AP005229.2-201ENST00000609980 697 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.03□□□□□ -2.24
RFX7Q2KHR2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.25
RFX7Q2KHR2 MIR16-2-201ENST00000362117 81 ntBASIC1.02□□□□□ -2.25
RFX7Q2KHR2 RNU6-778P-201ENST00000363269 103 ntBASIC1.02□□□□□ -2.25
RFX7Q2KHR2 MIR506-201ENST00000384998 124 ntBASIC1.02□□□□□ -2.25
RFX7Q2KHR2 MIR95-201ENST00000385072 81 ntBASIC1.02□□□□□ -2.25
RFX7Q2KHR2 RNU6-932P-201ENST00000391108 106 ntBASIC1.02□□□□□ -2.25
RFX7Q2KHR2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.02□□□□□ -2.25
RFX7Q2KHR2 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.02□□□□□ -2.25
RFX7Q2KHR2 EBAG9P1-201ENST00000418955 543 ntBASIC1.02□□□□□ -2.25
RFX7Q2KHR2 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.02□□□□□ -2.25
RFX7Q2KHR2 AC004941.2-201ENST00000427009 228 ntBASIC1.02□□□□□ -2.25
RFX7Q2KHR2 AL591212.2-201ENST00000433923 257 ntBASIC1.02□□□□□ -2.25
RFX7Q2KHR2 PTGES3P1-201ENST00000439531 483 ntBASIC1.02□□□□□ -2.25
RFX7Q2KHR2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.02□□□□□ -2.25
RFX7Q2KHR2 GXYLT1P1-201ENST00000446657 490 ntBASIC1.02□□□□□ -2.25
RFX7Q2KHR2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.02□□□□□ -2.25
RFX7Q2KHR2 RPL39P29-201ENST00000447779 157 ntBASIC1.02□□□□□ -2.25
RFX7Q2KHR2 AP003497.1-201ENST00000528472 562 ntBASIC1.02□□□□□ -2.25
RFX7Q2KHR2 AC090079.2-201ENST00000575289 768 ntBASIC1.02□□□□□ -2.25
RFX7Q2KHR2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.02□□□□□ -2.25
RFX7Q2KHR2 AC010900.2-201ENST00000604508 210 ntBASIC1.02□□□□□ -2.25
RFX7Q2KHR2 AC079416.3-201ENST00000624479 549 ntBASIC1.02□□□□□ -2.25
RFX7Q2KHR2 RBBP8P1-201ENST00000449447 1844 ntBASIC1.02□□□□□ -2.25
RFX7Q2KHR2 AC009541.1-201ENST00000438279 2662 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 SNORA25B-201ENST00000365507 128 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 RPL22P22-201ENST00000395439 379 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 ELOCP14-201ENST00000428070 331 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 USP9YP35-201ENST00000435696 412 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.01□□□□□ -2.25
RFX7Q2KHR2 ELOCP7-201ENST00000439968 331 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 CECR9-201ENST00000453421 199 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.01□□□□□ -2.25
RFX7Q2KHR2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.01□□□□□ -2.25
RFX7Q2KHR2 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.01□□□□□ -2.25
RFX7Q2KHR2 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.01□□□□□ -2.25
RFX7Q2KHR2 TMEM251P1-201ENST00000503717 318 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 AC093677.1-201ENST00000514414 678 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 DEFB108E-201ENST00000524692 240 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.01□□□□□ -2.25
RFX7Q2KHR2 MTCO2P15-201ENST00000532655 656 ntBASIC1.01□□□□□ -2.25
RFX7Q2KHR2 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.01□□□□□ -2.25
RFX7Q2KHR2 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms