Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL353729.1-201ENST00000425044 720 ntBASIC3.43□□□□□ -1.86
COPAP53621 AL078601.1-201ENST00000444542 271 ntBASIC3.43□□□□□ -1.86
COPAP53621 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.43□□□□□ -1.86
COPAP53621 RNU7-66P-201ENST00000459469 62 ntBASIC3.43□□□□□ -1.86
COPAP53621 CENPBD1P1-201ENST00000464061 469 ntBASIC3.43□□□□□ -1.86
COPAP53621 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.43□□□□□ -1.86
COPAP53621 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.43□□□□□ -1.86
COPAP53621 RNU6-864P-201ENST00000516256 108 ntBASIC3.43□□□□□ -1.86
COPAP53621 MIR892C-201ENST00000516410 77 ntBASIC3.43□□□□□ -1.86
COPAP53621 AC105029.1-201ENST00000520250 669 ntBASIC3.43□□□□□ -1.86
COPAP53621 CYCSP27-201ENST00000527643 293 ntBASIC3.43□□□□□ -1.86
COPAP53621 RPS3AP23-202ENST00000574601 686 ntBASIC3.43□□□□□ -1.86
COPAP53621 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.43□□□□□ -1.86
COPAP53621 MIR5680-201ENST00000577577 84 ntBASIC3.43□□□□□ -1.86
COPAP53621 MIR4782-201ENST00000577987 79 ntBASIC3.43□□□□□ -1.86
COPAP53621 MIR4276-201ENST00000584832 70 ntBASIC3.43□□□□□ -1.86
COPAP53621 MTND4LP5-201ENST00000605152 292 ntBASIC3.43□□□□□ -1.86
COPAP53621 AC107294.3-201ENST00000609211 526 ntBASIC3.43□□□□□ -1.86
COPAP53621 AL121757.2-201ENST00000611223 313 ntBASIC3.43□□□□□ -1.86
COPAP53621 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.43□□□□□ -1.86
COPAP53621 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.43□□□□□ -1.86
COPAP53621 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
COPAP53621 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.43□□□□□ -1.86
COPAP53621 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
COPAP53621 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
COPAP53621 Z83843.1-201ENST00000604070 3685 ntBASIC3.42□□□□□ -1.86
COPAP53621 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.42□□□□□ -1.86
COPAP53621 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
COPAP53621 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
COPAP53621 AC093908.1-201ENST00000623125 8092 ntBASIC3.42□□□□□ -1.86
COPAP53621 RNA5SP383-201ENST00000362934 120 ntBASIC3.42□□□□□ -1.86
COPAP53621 RNU6-1252P-201ENST00000363054 104 ntBASIC3.42□□□□□ -1.86
COPAP53621 RNU6-778P-201ENST00000363269 103 ntBASIC3.42□□□□□ -1.86
COPAP53621 RNA5SP197-201ENST00000363357 119 ntBASIC3.42□□□□□ -1.86
COPAP53621 RNU1-73P-201ENST00000383971 164 ntBASIC3.42□□□□□ -1.86
COPAP53621 MIR128-1-201ENST00000384921 82 ntBASIC3.42□□□□□ -1.86
COPAP53621 MIR1289-1-201ENST00000408836 144 ntBASIC3.42□□□□□ -1.86
COPAP53621 RNU6-607P-201ENST00000411283 108 ntBASIC3.42□□□□□ -1.86
COPAP53621 AC126124.2-201ENST00000413542 321 ntBASIC3.42□□□□□ -1.86
COPAP53621 RPL26P27-201ENST00000414397 437 ntBASIC3.42□□□□□ -1.86
COPAP53621 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.42□□□□□ -1.86
COPAP53621 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.42□□□□□ -1.86
COPAP53621 RPL23AP22-201ENST00000437556 453 ntBASIC3.42□□□□□ -1.86
COPAP53621 AC010099.1-201ENST00000455434 375 ntBASIC3.42□□□□□ -1.86
COPAP53621 RPL26P9-201ENST00000457466 433 ntBASIC3.42□□□□□ -1.86
COPAP53621 RPL23AP67-201ENST00000465341 474 ntBASIC3.42□□□□□ -1.86
COPAP53621 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.42□□□□□ -1.86
COPAP53621 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.42□□□□□ -1.86
COPAP53621 RNU1-86P-201ENST00000516108 154 ntBASIC3.42□□□□□ -1.86
COPAP53621 RNU1-107P-201ENST00000516617 154 ntBASIC3.42□□□□□ -1.86
COPAP53621 SNORA64.4-201ENST00000516632 81 ntBASIC3.42□□□□□ -1.86
COPAP53621 RNU6-273P-201ENST00000516937 96 ntBASIC3.42□□□□□ -1.86
COPAP53621 AC107934.2-201ENST00000518653 310 ntBASIC3.42□□□□□ -1.86
COPAP53621 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.42□□□□□ -1.86
COPAP53621 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.42□□□□□ -1.86
COPAP53621 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
COPAP53621 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.42□□□□□ -1.86
COPAP53621 AC087045.1-201ENST00000605856 382 ntBASIC3.42□□□□□ -1.86
COPAP53621 AC002044.1-201ENST00000606707 158 ntBASIC3.42□□□□□ -1.86
COPAP53621 AC009233.1-201ENST00000616477 371 ntBASIC3.42□□□□□ -1.86
COPAP53621 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.42□□□□□ -1.86
COPAP53621 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.42□□□□□ -1.86
COPAP53621 AL359697.1-201ENST00000624879 587 ntBASIC3.42□□□□□ -1.86
COPAP53621 U2.21-201ENST00000637295 81 ntBASIC3.42□□□□□ -1.86
COPAP53621 AC112487.2-201ENST00000637950 304 ntBASIC3.42□□□□□ -1.86
COPAP53621 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.42□□□□□ -1.86
COPAP53621 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.42□□□□□ -1.86
COPAP53621 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.41□□□□□ -1.86
COPAP53621 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
COPAP53621 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.41□□□□□ -1.86
COPAP53621 Y_RNA.11-201ENST00000362375 109 ntBASIC3.41□□□□□ -1.86
COPAP53621 RNU6-266P-201ENST00000364225 107 ntBASIC3.41□□□□□ -1.86
COPAP53621 RNU6-166P-201ENST00000384371 107 ntBASIC3.41□□□□□ -1.86
COPAP53621 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.41□□□□□ -1.86
COPAP53621 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.41□□□□□ -1.86
COPAP53621 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.41□□□□□ -1.86
COPAP53621 SKA2P1-201ENST00000425592 390 ntBASIC3.41□□□□□ -1.86
COPAP53621 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.41□□□□□ -1.86
COPAP53621 TOMM20P4-201ENST00000427861 435 ntBASIC3.41□□□□□ -1.86
COPAP53621 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.41□□□□□ -1.86
COPAP53621 HMGB1P18-201ENST00000438801 619 ntBASIC3.41□□□□□ -1.86
COPAP53621 RPL23AP58-201ENST00000440453 469 ntBASIC3.41□□□□□ -1.86
COPAP53621 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.41□□□□□ -1.86
COPAP53621 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.41□□□□□ -1.86
COPAP53621 RPS26P21-201ENST00000475397 348 ntBASIC3.41□□□□□ -1.86
COPAP53621 RN7SL504P-201ENST00000494496 287 ntBASIC3.41□□□□□ -1.86
COPAP53621 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.41□□□□□ -1.86
COPAP53621 FGF7P4-201ENST00000509595 295 ntBASIC3.41□□□□□ -1.86
COPAP53621 Y_RNA.675-201ENST00000516389 149 ntBASIC3.41□□□□□ -1.86
COPAP53621 RNU6-703P-201ENST00000516946 107 ntBASIC3.41□□□□□ -1.86
COPAP53621 AC069113.1-201ENST00000517763 267 ntBASIC3.41□□□□□ -1.86
COPAP53621 AC104027.1-201ENST00000521887 300 ntBASIC3.41□□□□□ -1.86
COPAP53621 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.41□□□□□ -1.86
COPAP53621 AP000889.2-201ENST00000532684 490 ntBASIC3.41□□□□□ -1.86
COPAP53621 LRRC37A5P-203ENST00000580181 585 ntBASIC3.41□□□□□ -1.86
COPAP53621 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.41□□□□□ -1.86
COPAP53621 AC104237.2-201ENST00000612456 443 ntBASIC3.41□□□□□ -1.86
COPAP53621 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.41□□□□□ -1.86
COPAP53621 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
COPAP53621 MTND5P7-201ENST00000413558 1798 ntBASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms