Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.18□□□□□ -2.38
CPS1P31327 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.18□□□□□ -2.38
CPS1P31327 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.18□□□□□ -2.38
CPS1P31327 SNORA4.4-201ENST00000515921 135 ntBASIC0.18□□□□□ -2.38
CPS1P31327 AC008088.1-201ENST00000580993 280 ntBASIC0.18□□□□□ -2.38
CPS1P31327 AP002826.1-201ENST00000608835 315 ntBASIC0.18□□□□□ -2.38
CPS1P31327 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CPS1P31327 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.17□□□□□ -2.38
CPS1P31327 AC007742.1-201ENST00000425789 329 ntBASIC0.17□□□□□ -2.38
CPS1P31327 ELOCP26-201ENST00000436067 329 ntBASIC0.17□□□□□ -2.38
CPS1P31327 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.17□□□□□ -2.38
CPS1P31327 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.17□□□□□ -2.38
CPS1P31327 AC002400.1-201ENST00000569310 726 ntBASIC0.17□□□□□ -2.38
CPS1P31327 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.17□□□□□ -2.38
CPS1P31327 AL022345.2-201ENST00000606307 135 ntBASIC0.17□□□□□ -2.38
CPS1P31327 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
CPS1P31327 MIR6516-201ENST00000630554 81 ntBASIC0.17□□□□□ -2.38
CPS1P31327 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CPS1P31327 SNORD1A-201ENST00000364968 72 ntBASIC0.16□□□□□ -2.38
CPS1P31327 RNU6-39P-201ENST00000384344 107 ntBASIC0.16□□□□□ -2.38
CPS1P31327 MIR1283-2-201ENST00000408621 87 ntBASIC0.16□□□□□ -2.38
CPS1P31327 RPEP5-201ENST00000441137 268 ntBASIC0.16□□□□□ -2.38
CPS1P31327 AC244505.3-201ENST00000454598 187 ntBASIC0.16□□□□□ -2.38
CPS1P31327 COX6CP6-201ENST00000490840 228 ntBASIC0.16□□□□□ -2.38
CPS1P31327 AL163195.1-201ENST00000496941 348 ntBASIC0.16□□□□□ -2.38
CPS1P31327 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.16□□□□□ -2.38
CPS1P31327 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.16□□□□□ -2.38
CPS1P31327 RPL21P136-201ENST00000605378 396 ntBASIC0.16□□□□□ -2.38
CPS1P31327 AC240442.1-201ENST00000616055 283 ntBASIC0.16□□□□□ -2.38
CPS1P31327 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.16□□□□□ -2.38
CPS1P31327 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.15□□□□□ -2.39
CPS1P31327 RPS26P5-201ENST00000418544 335 ntBASIC0.15□□□□□ -2.39
CPS1P31327 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.15□□□□□ -2.39
CPS1P31327 RPL36AP53-201ENST00000432891 316 ntBASIC0.15□□□□□ -2.39
CPS1P31327 SNORA31.22-201ENST00000517204 135 ntBASIC0.15□□□□□ -2.39
CPS1P31327 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.15□□□□□ -2.39
CPS1P31327 AP001893.2-201ENST00000526949 202 ntBASIC0.15□□□□□ -2.39
CPS1P31327 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.15□□□□□ -2.39
CPS1P31327 MIR4667-201ENST00000578933 66 ntBASIC0.15□□□□□ -2.39
CPS1P31327 AP001180.6-201ENST00000584918 159 ntBASIC0.15□□□□□ -2.39
CPS1P31327 SNORD95.1-201ENST00000364099 68 ntBASIC0.14□□□□□ -2.39
CPS1P31327 DSTNP4-201ENST00000399472 474 ntBASIC0.14□□□□□ -2.39
CPS1P31327 RNU2-63P-201ENST00000410792 194 ntBASIC0.14□□□□□ -2.39
CPS1P31327 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.14□□□□□ -2.39
CPS1P31327 PNRC2P1-201ENST00000423940 420 ntBASIC0.14□□□□□ -2.39
CPS1P31327 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.14□□□□□ -2.39
CPS1P31327 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.14□□□□□ -2.39
CPS1P31327 AC026271.5-201ENST00000577873 130 ntBASIC0.14□□□□□ -2.39
CPS1P31327 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.14□□□□□ -2.39
CPS1P31327 BX284668.6-201ENST00000606899 438 ntBASIC0.14□□□□□ -2.39
CPS1P31327 MTND4P14-201ENST00000435799 1354 ntBASIC0.14□□□□□ -2.39
CPS1P31327 MIR604-201ENST00000384880 94 ntBASIC0.13□□□□□ -2.39
CPS1P31327 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.13□□□□□ -2.39
CPS1P31327 HAUS1P3-201ENST00000523909 662 ntBASIC0.13□□□□□ -2.39
CPS1P31327 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.13□□□□□ -2.39
CPS1P31327 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.13□□□□□ -2.39
CPS1P31327 MIR8065-201ENST00000620577 100 ntBASIC0.13□□□□□ -2.39
CPS1P31327 AC097372.5-201ENST00000623665 376 ntBASIC0.13□□□□□ -2.39
CPS1P31327 RNU4-73P-201ENST00000363164 141 ntBASIC0.13□□□□□ -2.39
CPS1P31327 SNORA25-201ENST00000384384 134 ntBASIC0.13□□□□□ -2.39
CPS1P31327 Y_RNA.571-201ENST00000384753 98 ntBASIC0.13□□□□□ -2.39
CPS1P31327 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.13□□□□□ -2.39
CPS1P31327 AC027119.1-201ENST00000440877 241 ntBASIC0.13□□□□□ -2.39
CPS1P31327 MTCO1P44-201ENST00000441935 243 ntBASIC0.13□□□□□ -2.39
CPS1P31327 SNRPGP12-201ENST00000449481 213 ntBASIC0.13□□□□□ -2.39
CPS1P31327 HSPE1P13-201ENST00000451143 297 ntBASIC0.13□□□□□ -2.39
CPS1P31327 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
CPS1P31327 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.13□□□□□ -2.39
CPS1P31327 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
CPS1P31327 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
CPS1P31327 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.13□□□□□ -2.39
CPS1P31327 Y_RNA.488-201ENST00000384403 102 ntBASIC0.12□□□□□ -2.39
CPS1P31327 Y_RNA.552-201ENST00000384665 112 ntBASIC0.12□□□□□ -2.39
CPS1P31327 MTCYBP29-201ENST00000436327 1006 ntBASIC0.12□□□□□ -2.39
CPS1P31327 AC025465.3-201ENST00000510570 311 ntBASIC0.12□□□□□ -2.39
CPS1P31327 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.12□□□□□ -2.39
CPS1P31327 AC087897.1-201ENST00000550134 156 ntBASIC0.12□□□□□ -2.39
CPS1P31327 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.12□□□□□ -2.39
CPS1P31327 MIR411-201ENST00000362239 96 ntBASIC0.11□□□□□ -2.39
CPS1P31327 SNORD114-31-201ENST00000363219 75 ntBASIC0.11□□□□□ -2.39
CPS1P31327 RNU6-439P-201ENST00000384188 106 ntBASIC0.11□□□□□ -2.39
CPS1P31327 RNU6-712P-201ENST00000410558 100 ntBASIC0.11□□□□□ -2.39
CPS1P31327 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.11□□□□□ -2.39
CPS1P31327 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.11□□□□□ -2.39
CPS1P31327 SNORA31.6-201ENST00000516241 130 ntBASIC0.11□□□□□ -2.39
CPS1P31327 AC018659.1-201ENST00000551083 169 ntBASIC0.11□□□□□ -2.39
CPS1P31327 DUXAP1-201ENST00000556632 463 ntBASIC0.11□□□□□ -2.39
CPS1P31327 FAM60CP-201ENST00000591086 664 ntBASIC0.11□□□□□ -2.39
CPS1P31327 SNRPGP17-201ENST00000603780 214 ntBASIC0.11□□□□□ -2.39
CPS1P31327 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.11□□□□□ -2.39
CPS1P31327 AL121652.1-201ENST00000608851 448 ntBASIC0.11□□□□□ -2.39
CPS1P31327 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.11□□□□□ -2.39
CPS1P31327 MIR6134-201ENST00000617606 109 ntBASIC0.11□□□□□ -2.39
CPS1P31327 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.11□□□□□ -2.39
CPS1P31327 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.11□□□□□ -2.39
CPS1P31327 RNU6-110P-201ENST00000384508 104 ntBASIC0.1□□□□□ -2.39
CPS1P31327 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
CPS1P31327 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
CPS1P31327 RNU6-750P-201ENST00000390946 107 ntBASIC0.1□□□□□ -2.39
CPS1P31327 Y_RNA.610-201ENST00000410681 103 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms