Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SNORA33.2-201ENST00000365413 134 ntBASIC4.6□□□□□ -1.67
ERCC3P19447 Y_RNA.422-201ENST00000384054 114 ntBASIC4.6□□□□□ -1.67
ERCC3P19447 U1.1-201ENST00000384101 164 ntBASIC4.6□□□□□ -1.67
ERCC3P19447 BTF3L4P2-201ENST00000392798 346 ntBASIC4.6□□□□□ -1.67
ERCC3P19447 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ERCC3P19447 RNU6-174P-201ENST00000410406 106 ntBASIC4.6□□□□□ -1.67
ERCC3P19447 SNORA57.3-201ENST00000411095 141 ntBASIC4.6□□□□□ -1.67
ERCC3P19447 MTND2P23-201ENST00000422990 651 ntBASIC4.6□□□□□ -1.67
ERCC3P19447 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.6□□□□□ -1.67
ERCC3P19447 YME1L1P1-201ENST00000429435 297 ntBASIC4.6□□□□□ -1.67
ERCC3P19447 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.6□□□□□ -1.67
ERCC3P19447 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ERCC3P19447 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.6□□□□□ -1.67
ERCC3P19447 AC013470.1-201ENST00000453438 462 ntBASIC4.6□□□□□ -1.67
ERCC3P19447 AL049830.2-201ENST00000480072 201 ntBASIC4.6□□□□□ -1.67
ERCC3P19447 RNA5SP179-201ENST00000517284 121 ntBASIC4.6□□□□□ -1.67
ERCC3P19447 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.6□□□□□ -1.67
ERCC3P19447 CYCSP30-201ENST00000546447 172 ntBASIC4.6□□□□□ -1.67
ERCC3P19447 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.6□□□□□ -1.67
ERCC3P19447 MIR3944-201ENST00000581277 108 ntBASIC4.6□□□□□ -1.67
ERCC3P19447 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.6□□□□□ -1.67
ERCC3P19447 AC069200.1-201ENST00000609511 323 ntBASIC4.6□□□□□ -1.67
ERCC3P19447 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ERCC3P19447 AL161912.2-201ENST00000565707 3007 ntBASIC4.59□□□□□ -1.67
ERCC3P19447 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ERCC3P19447 Y_RNA.5-201ENST00000362334 102 ntBASIC4.59□□□□□ -1.67
ERCC3P19447 Y_RNA.28-201ENST00000362554 111 ntBASIC4.59□□□□□ -1.67
ERCC3P19447 Y_RNA.123-201ENST00000363338 102 ntBASIC4.59□□□□□ -1.67
ERCC3P19447 SNORD46.1-201ENST00000364139 104 ntBASIC4.59□□□□□ -1.67
ERCC3P19447 Y_RNA.533-201ENST00000384596 114 ntBASIC4.59□□□□□ -1.67
ERCC3P19447 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.59□□□□□ -1.67
ERCC3P19447 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.59□□□□□ -1.67
ERCC3P19447 AC093578.1-201ENST00000415219 368 ntBASIC4.59□□□□□ -1.67
ERCC3P19447 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.59□□□□□ -1.67
ERCC3P19447 RPS15AP5-201ENST00000436276 388 ntBASIC4.59□□□□□ -1.67
ERCC3P19447 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ERCC3P19447 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.59□□□□□ -1.67
ERCC3P19447 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.59□□□□□ -1.67
ERCC3P19447 SNORD116.3-201ENST00000517176 78 ntBASIC4.59□□□□□ -1.67
ERCC3P19447 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.59□□□□□ -1.67
ERCC3P19447 AC022634.1-201ENST00000520765 532 ntBASIC4.59□□□□□ -1.67
ERCC3P19447 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.59□□□□□ -1.67
ERCC3P19447 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ERCC3P19447 AC091167.4-201ENST00000605079 184 ntBASIC4.59□□□□□ -1.67
ERCC3P19447 AL138880.2-201ENST00000616214 239 ntBASIC4.59□□□□□ -1.67
ERCC3P19447 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.59□□□□□ -1.67
ERCC3P19447 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ERCC3P19447 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.67
ERCC3P19447 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
ERCC3P19447 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.59□□□□□ -1.67
ERCC3P19447 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
ERCC3P19447 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
ERCC3P19447 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ERCC3P19447 MTND4P1-201ENST00000457501 1466 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
ERCC3P19447 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ERCC3P19447 SNORA63.1-201ENST00000362493 131 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 RNU6-227P-201ENST00000362865 103 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 RNU6-942P-201ENST00000363002 107 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 Y_RNA.112-201ENST00000363250 102 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 RNA5SP322-201ENST00000363617 119 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 U3.6-201ENST00000363622 211 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 RNU1-140P-201ENST00000365040 165 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 Y_RNA.314-201ENST00000365114 102 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 RNU6-639P-201ENST00000384074 107 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 SNORA41-201ENST00000384675 132 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 U8.11-201ENST00000384699 133 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 U8.12-201ENST00000384701 133 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 SNORA11.1-201ENST00000408133 129 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 RNU2-49P-201ENST00000410666 184 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.58□□□□□ -1.68
ERCC3P19447 U8.18-201ENST00000459285 133 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 RNU7-170P-201ENST00000459303 61 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 AC025554.1-201ENST00000505641 188 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.58□□□□□ -1.68
ERCC3P19447 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.58□□□□□ -1.68
ERCC3P19447 AC006199.1-201ENST00000548728 219 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.58□□□□□ -1.68
ERCC3P19447 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.58□□□□□ -1.68
ERCC3P19447 MIR432-201ENST00000606207 94 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 AC005046.1-201ENST00000608515 625 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 AC007485.1-201ENST00000616755 206 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ERCC3P19447 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.58□□□□□ -1.68
ERCC3P19447 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ERCC3P19447 HSPA8P1-201ENST00000425843 1833 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
ERCC3P19447 MTND5P9-201ENST00000503854 1755 ntBASIC4.58□□□□□ -1.68
ERCC3P19447 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
ERCC3P19447 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ERCC3P19447 AC004944.1-201ENST00000517807 3059 ntBASIC4.57□□□□□ -1.68
ERCC3P19447 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ERCC3P19447 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
ERCC3P19447 MIR423-201ENST00000362201 94 ntBASIC4.57□□□□□ -1.68
ERCC3P19447 RNY1P16-201ENST00000363063 111 ntBASIC4.57□□□□□ -1.68
ERCC3P19447 RNU6-596P-201ENST00000365395 98 ntBASIC4.57□□□□□ -1.68
ERCC3P19447 AL591034.2-201ENST00000402839 359 ntBASIC4.57□□□□□ -1.68
ERCC3P19447 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.57□□□□□ -1.68
ERCC3P19447 AC243428.1-201ENST00000421099 264 ntBASIC4.57□□□□□ -1.68
ERCC3P19447 NUP35P1-201ENST00000422734 947 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms